| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1758 |
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| Symbol | |
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| ID | 5193603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2012948 |
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| End bp | 2014330 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586228 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001267098 |
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| Protein GI | 148546996 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0174265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCGC AAGACAACAA GAAACAGCGC TCACTGCAGC ACGGCCTGAC TTCCCGTCAG
GTTTCCATGA TCTCCATTGC CGGCATCATC GGCGCCGGGC TGTTCATCGG GTCCTCCAAC
GCCATTGCCA CCGCCGGCCC GGCCATCCTC ATCTCCTACG CCATGACTGG CCTGCTGGTC
TTGCTGGTGA TGCGCATGCT GGGTGAAATG GCCATCGCAA ACCCCAACAG CGGCTCTTTT
TCCACCTACG CCTCGGAGGC CATCGGGCCT TGGGCGGGCT TTACCATTGG CTGGCTGTAC
TGGTGGTTCT GGGTGTTGAT CATTCCGGTG GAAGCCATTG CCGGTGCTGA CATCCTGCAT
GCCTACTTCC CTGGCGTGCC GTCCTGGCTG TTCGCCTTCC TGATCATGCT GGTGCTGTCG
GGCACCAACC TGGTCAGCGT GAAGAACTTC GGTGCTTTCG AGTACTGGTT CGCGTTGGTC
AAGGTGGTCG CGATCATTGG CTTCATCGGG GTGTGCACCT TGGCGGTGTT CGGTTTCTGG
CCGCTGGCCG AGGTCTCCGG GGTCAGCCGA CTGTGGGACA GCGGTGGTTT CATGCCCAAT
GGGTTCGGGA CGGTGCTTGG GGGCGTGCTG ATCACCATCT TCTCGTTCTT CGGTGCCGAA
ATCGTCACCA TCGCGGCGGA CGAAACCGCC AACCCGAAAG ACAAGATTCG CCGCGCCACC
AACCTGGTGG TGTACCGCAT CGCCATTTTC TACCTGGCGT CGATCTTCCT GGTGGTGTCG
CTGGTGGCCT GGAACGACCC CGGGCTGAAA GCAGTAGGGT CGTTCCAGCG TGTACTGGAA
GTGCTGAACG TGCCGGGCGC CAAGTTGCTG GTTGACCTGG TGGTGCTGGT GGCGGTGACA
AGTTGCATGA ACTCGGGGCT CTACACGGCG TCGCGCATGC TCTATTCGCT TGGCGCGCGT
GGCCAGGCGC TGAGCGTGAC CAAGCGCATC TCCGGTTCCG GCGTGCCGAC CGTGGCAGTG
ATCTTCTCGA CCCTGGCGGG TTTCGCTGGC TGCCTCGTCA ACTATGTGTT CCCGGGCAAG
GTGTTTGGCT TCCTGCTGTC GACCACTGGC GCCATCGCTT TGCTGGTGTA CCTGGTCATT
GCCGTGTCGC AGCTGCGCAT GCGTGCCCGT GCCGAGCGTG AAGGGCGCCC GCTGGAACTG
AAGATGTGGC TGTTCCCATG GCTGACCTGG CTGGTGATCG GCACCATCGT CATGGTGCTG
GGCTACATGC TGTTCAGCGA CGCCTACCGC TATGAGACGC TGATGACTGC CGGGGTGACC
GCGTTCATCC TGCTGGTTTC ACTGACCCAG CGGCGTACGA AGATGGTTGC CCAGACGGTC
TGA
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| Protein sequence | MASQDNKKQR SLQHGLTSRQ VSMISIAGII GAGLFIGSSN AIATAGPAIL ISYAMTGLLV
LLVMRMLGEM AIANPNSGSF STYASEAIGP WAGFTIGWLY WWFWVLIIPV EAIAGADILH
AYFPGVPSWL FAFLIMLVLS GTNLVSVKNF GAFEYWFALV KVVAIIGFIG VCTLAVFGFW
PLAEVSGVSR LWDSGGFMPN GFGTVLGGVL ITIFSFFGAE IVTIAADETA NPKDKIRRAT
NLVVYRIAIF YLASIFLVVS LVAWNDPGLK AVGSFQRVLE VLNVPGAKLL VDLVVLVAVT
SCMNSGLYTA SRMLYSLGAR GQALSVTKRI SGSGVPTVAV IFSTLAGFAG CLVNYVFPGK
VFGFLLSTTG AIALLVYLVI AVSQLRMRAR AEREGRPLEL KMWLFPWLTW LVIGTIVMVL
GYMLFSDAYR YETLMTAGVT AFILLVSLTQ RRTKMVAQTV
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