Gene Pput_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1746 
Symbol 
ID5192207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1998167 
End bp1998580 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content59% 
IMG OID640586216 
ProductNADH dehydrogenase subunit A 
Protein accessionYP_001267086 
Protein GI148546984 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.423613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.315671 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATT CGGCAGGACT CATCGCCCAC AACTGGGGCT TTGCCATCTT CCTCCTGGGT 
GTCGTCGGCC TGTGCGCCTT CATGCTCGGC CTGTCCAGCC TGCTCGGTAG CAAGGCTTGG
GGCCGCGCCA AGAACGAACC CTTCGAATCC GGCATGCTGC CCGTAGGCAG CGCGCGCCTG
CGCCTGTCCG CCAAATTCTA TCTGGTCGCG ATGCTGTTCG TGATCTTCGA TATCGAAGCC
CTCTTTCTCT TTGCATGGTC TGTGTCCGTC CGCGAAAGCG GCTGGACCGG ATTCGTCGAA
GCACTCGTTT TCATAGCAAT TCTGTTGGCA GGTCTTGTCT ACCTATGGCG CGTCGGGGCA
CTTGATTGGG CTCCCGAAGG TCGCCGCAAG CGGCAAGCGA AGCTGAAACA ATGA
 
Protein sequence
MSDSAGLIAH NWGFAIFLLG VVGLCAFMLG LSSLLGSKAW GRAKNEPFES GMLPVGSARL 
RLSAKFYLVA MLFVIFDIEA LFLFAWSVSV RESGWTGFVE ALVFIAILLA GLVYLWRVGA
LDWAPEGRRK RQAKLKQ