| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1716 |
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| Symbol | |
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| ID | 5190861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1965507 |
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| End bp | 1966526 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586186 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001267056 |
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| Protein GI | 148546954 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4239] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.937938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT CCCCCCTCAA CCGCCGGCGC TTCGAGCGTT TCAAGGCCAA CCGCCGTGGC
TGGTGGTCGC TGTGGCTGTT CCTGATTCTG TTCGGGCTGA GCCTGGGCGC CGAACTGATC
GCCAACGACA AACCGATCGC CGTACGTTAC GACGGCCAAT GGTACTTCCC GGCGTTCAAG
CGCTACCCGG AAACCACCTT CGGCGGAGAA TTCCCGCTGG AAGCCAACTA CAAGAGCCCC
TACATCCGCG AACTGCTGGC GAAGAAAGAC AGCTTCGTGC TGTGGGCGCC CATTCCGTTC
AGCTACCAGA GCATCAACTA TGACCTGCGC GTCCCCGCCC CCGCCCCACC TTCGGCGGAC
AACTGGCTGG GCACCGACGA CCAGGGCCGC GACGTGCTGG CGCGGGTGAT CTACGGCTTC
CGCATCTCGG TTCTGTTTGC CCTCACCTTG ACCGTGGCCA GCTCCATTGT TGGCGTCATC
GCAGGCGCCC TGCAGGGGTT CTACGGGGGT TGGGTCGACC TCGCCGGGCA ACGCTTTCTG
GAAATCTGGT CCGGCCTGCC TGTGTTGTAC CTGCTGATCA TCCTGGCCAG CTTCGTGCAG
CCCAACTTCT GGTGGCTGCT GGGCATCATG CTGCTGTTCT CGTGGATGAG CCTGGTGGAC
GTGGTACGCG CCGAGTTCCT GCGCGGGCGC AACCTGGAAT ACGTGCGCGC CGCGCGCGCC
CTGGGCATGC GCAACGGCGC GATCATGTAC CGGCACATCC TGCCCAACGC CATGATCTCG
ACCATGACCT TCATGCCATT CATTCTCACC GGCGCCATCG GCACCCTCAC CGCCCTGGAC
TTCCTCGGCT TCGGCCTGCC CGCCGGTTCG CCCTCGCTGG GCGAACTGGT GGCGCAAGGC
AAGTCCAACC TGCAAGCGCC ATGGCTGGGC ATCAGCGCCT TTGCCGTGCT GGCGCTGATG
CTGAGCCTGC TGGTGTTCAT CGGCGAATCC GCCCGCGACG CCTTCGACCC GAGGAAGTGA
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| Protein sequence | MALSPLNRRR FERFKANRRG WWSLWLFLIL FGLSLGAELI ANDKPIAVRY DGQWYFPAFK
RYPETTFGGE FPLEANYKSP YIRELLAKKD SFVLWAPIPF SYQSINYDLR VPAPAPPSAD
NWLGTDDQGR DVLARVIYGF RISVLFALTL TVASSIVGVI AGALQGFYGG WVDLAGQRFL
EIWSGLPVLY LLIILASFVQ PNFWWLLGIM LLFSWMSLVD VVRAEFLRGR NLEYVRAARA
LGMRNGAIMY RHILPNAMIS TMTFMPFILT GAIGTLTALD FLGFGLPAGS PSLGELVAQG
KSNLQAPWLG ISAFAVLALM LSLLVFIGES ARDAFDPRK
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