Gene Pput_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1567 
Symbol 
ID5191193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1750616 
End bp1751488 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID640586036 
ProductUrea transporter 
Protein accessionYP_001266907 
Protein GI148546805 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4413] Urea transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0796625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACCA AAAATTTCGT CAACCCGTGC CCCGACTGGG CCACGGCGTT ACTCAACGGC 
TTCAGCCAGG TGCTGCTGCT GCGCAACCCC CTGTGCGGCC TGTGCTGCCT GCTGGCCATC
CTGCTGACGG CGCCCAACCT GGTCGGCGGC GCCCTGCTTG GCGCCCTGGC CGGCCTGCTC
ACCGCCCAGG CACGCGGCTA TGACCGTGCC GACCGCCAAG CCGGGCTGTA CTGCTACAAC
GGCGTGCTGA TCGGCATCCT GATCAGCGCC GTGCTGCCCT GGTCGGTCAT ATTGCCCCCC
CTGATCATCG CCGCCGGCGG CCTGTCCAGC ATCATCACCC ACCAGTGGCG CAAGCGCGGC
GGCAAGTTGC TGGTCGCCTA CACCGCGCCA TTCGTGCTGC TGGGCTGGGG CACACTGCTA
GTCGTCAGCC CCTCACCCAG CGGCTTCGTC GAAGCTGACC CGCTGTACGC GTTGGCCCGC
GGCGTGGGCC AGATCTTCCT GCTCGACCAG CCCTTGGCCG GGTTGCTGAT CATCGTCGGC
ATGTTCATCG CCAACCCCTA TGCGGCGCTG TGGGCGGTGA TCGGCTCGGC CATTGGTGGC
GGCGTGGCGT TGCTCGCCGA CCAGGCGCAG GCCGCCTGGT TAGGTCTTTA CGGTTTCAAT
GGCGCACTGG CGGCACTGGC CTTCAGCAGG CAAGGTGAAA AACCTTGGGT GACGCTGCTG
GCGATAGCGT TGGCCCTGCT GTTGCAACCG CTGTTCAAGC TGCTGCCAGT GCCTGGCTTG
ACCGCCCCCT TCGTTGCCGC CTGCTGGCTG ATGCACTTGG GCAGTCACCT GGCGCAACCC
AGGCAGCGCA ACGCCAGCCG CTTGCACGGC TGA
 
Protein sequence
MYTKNFVNPC PDWATALLNG FSQVLLLRNP LCGLCCLLAI LLTAPNLVGG ALLGALAGLL 
TAQARGYDRA DRQAGLYCYN GVLIGILISA VLPWSVILPP LIIAAGGLSS IITHQWRKRG
GKLLVAYTAP FVLLGWGTLL VVSPSPSGFV EADPLYALAR GVGQIFLLDQ PLAGLLIIVG
MFIANPYAAL WAVIGSAIGG GVALLADQAQ AAWLGLYGFN GALAALAFSR QGEKPWVTLL
AIALALLLQP LFKLLPVPGL TAPFVAACWL MHLGSHLAQP RQRNASRLHG