| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1565 |
|---|
| Symbol | |
|---|
| ID | 5193701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1748541 |
|---|
| End bp | 1749539 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586034 |
|---|
| Product | sulfate ABC transporter, periplasmic sulfate-binding protein |
|---|
| Protein accession | YP_001266905 |
|---|
| Protein GI | 148546803 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1613] ABC-type sulfate transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR00971] sulfate/thiosulfate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.105023 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGC TCTTCACCGC CTCGCTGCTC GCCGCAGGCC TGGCCCTGGG CAACCTCGCC
CAGGCCGCCC CCACCCTGCT CAACGTTTCC TACGACGTGA TGCGCGACTT CTACAAGGAC
TACAACCCGG CCTTCCAGAA GCACTGGGAA GCCGAGCACA ACGAGAAGGT CAACGTGCAG
ATGTCCTTCG GCGGCTCGAG CAAGCAGGCC CGTGCAGTGA TCGATGGCCT GCCGGCCGAT
GTCATCACCA TGAACATGGC CACCGACATC AACGCCCTGG CAGACAACGG CAAGCTGGTG
CCCGACAACT GGGTAACCCG CCTGCCGAAC AACAGCGCGC CGTTCACCTC GGCCACTGTG
TTCATCGTGC GCAAGGGCAA CCCGAAAGCC CTCAAAGACT GGCCCGACCT GCTCAAGGAC
GGTGTGCAGG TGATCGTGCC CAACCCGAAA ACCTCGGGTA ATGGCCGCTA TACCTACCTG
TCGGCCTGGG GCTACGTACT CAAGCAAGGC GGCGATGAAA GCAAAGCCCG CGATTTCGTC
GGCAAGCTGT TCAAACAGGC ACCCGTGCTG GACACCGGTG GCCGTGCCGC CACCACCACG
TTCATGACCA ACCAGATCGG TGACGTGCTG GTCACCTTCG AGAACGAAGC CGAGATGATC
GCCCGCGAGT TCGGCCGCGA CCAGTTCGAA GTGGTCTACC CAAGCGTATC GGCCGAAGCC
GAGCCACCGG TGACGGTGGT CGACAAGGTG GTGGTCAGAA AAGGCACCCA GGCCGTGGCC
GAGGAATACC TGAAGTACCT GTGGTCACCC GCAGCCCAGG AGATCGCCGC CAACAACTAC
CTGCGCCCGC GTGATGCGAC GGTACTGGCC AAGTACACCG ACCGCTTCCC GAAAGTGGAC
TTCCTGTCGG TGGAGAAAAC CTTCGGTGAC TGGCGTACCG TGCAGAAGAC CCACTTCAAT
GACGGTGGGG TGTTTGACCA GATCTATGCC AACCAATAG
|
|---|
| Protein sequence | MKKLFTASLL AAGLALGNLA QAAPTLLNVS YDVMRDFYKD YNPAFQKHWE AEHNEKVNVQ
MSFGGSSKQA RAVIDGLPAD VITMNMATDI NALADNGKLV PDNWVTRLPN NSAPFTSATV
FIVRKGNPKA LKDWPDLLKD GVQVIVPNPK TSGNGRYTYL SAWGYVLKQG GDESKARDFV
GKLFKQAPVL DTGGRAATTT FMTNQIGDVL VTFENEAEMI AREFGRDQFE VVYPSVSAEA
EPPVTVVDKV VVRKGTQAVA EEYLKYLWSP AAQEIAANNY LRPRDATVLA KYTDRFPKVD
FLSVEKTFGD WRTVQKTHFN DGGVFDQIYA NQ
|
|---|
| |