| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1558 |
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| Symbol | |
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| ID | 5190764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1740674 |
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| End bp | 1742206 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586028 |
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| Product | permease for cytosine/purine, uracil, thiamine, allantoin |
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| Protein accession | YP_001266899 |
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| Protein GI | 148546797 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.462684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGCA GCCTCGACCT TGCCCCTGAA CAATCCGTCG CCAGCACACA CCCCGCGTCC
ACGCTTGCCG GTCACCAGCC GGACCTTGTT CTCAGCCCGC GCCTGCATAA CCGCGACCTG
GCGCCAACGC GTATGGAAGG CCGTCGCTGG GGCGGCTACA GCATCTTCGC GCTGTGGACC
AACGATGTGC ACAATATCGC CAACTATTCG TTCGCCATGG GCTTGTTCGC CCTCGGCCTC
GGCGGCTGGC AAATTCTGTT GTCGCTGGCC ATCGGCGCGG TCCTGGTGTA CTTCTTCATG
AACCTGTCGG GTTACATGGG CCAGAAAACC GGGGTACCGT TCCCGGTCAT CAGCCGCATT
GCCTTCGGCA TCCACGGCGC GCAGATCCCG GCGCTGATCC GTGCCGTCAT CGCCATCGCC
TGGTTCGGCA TCCAGACCTA CCTGGCATCG GTGGTGCTGC GGGTGCTGCT CACCGCCGTT
TGGCCGCAAA TGGCAGCCTA CGACCACGAC AGCATCCTCG GCCTGTCGAG CCTGGGCTGG
GTGTGTTTCG TGTCGATCTG GCTGGTGCAG CTGGTGATCC TGGCCTACGG CATGGAGATG
GTGCGCCGTT ACGAGGCCTT TGCCGGGCCT GTGATCCTGC TGACCGTCGC CGCCCTGGCG
GTGTTCATGT ACTTCAAGGC CGACGCGCGC ATTGCCTGGT CGGTGGCTAC CCCGCTGGCC
GGCTACGAGA TGTGGCGTAA CATCTTCGCC GGCGGCGCAC TGTGGCTGGC GATCTACGGC
ACCCTGGTGC TGAACTTCTG TGACTTCGCC CGCTCCTCGC CTTGCCGCAA GACCATCCGC
GTCGGCAACT TCTGGGGCCT GCCGGTGAAC ATCCTGGTAT TCGCCGTGAT CACCGTGGTG
CTGTGCGGCG CGCAATTCCA GATCAACGGC CAGATCATCG ACAGCCCGAC GCAGATCGTC
GCCGCCATAC CCAGCACGCC ATTCCTGGTG CTCGGCTGCC TGGCCTTCCT GATCGTCACC
GTGGCGGTGA ACATCATGGC CAACTTCGTC GCCCCAGCCT TCGTACTCAG CAACCTGGCA
CCGCGCCACC TGAACTTCCG CCGTGCCGGG CTGATCAGTG CCACCCTGGC GGTGCTGATC
CTGCCCTGGA ACCTGTACAA CAGCCCGCTG GTCATCGTGT ACTTCCTGTC GGGCCTGGGC
GCCCTGCTCG GCCCGCTGTA CGGCGTGATC ATGTCCGACT ACTGGTTGCT GCGCAAAGGC
TGCATCAACG TGCCAGAGCT GTATACCGAG CACCCGGCCG GCGCCTATCA CTACAGCAAG
GGCATCAACC TGCACGCCGT GGCCGCCTTC GTGCCGGCCG CACTGCTGGC CATCGTGCTG
GCCCTGGTGC CCAACTTCCA GGGTATCGCG CCGTTTTCCT GGCTGATCGG TGCCGGCATC
GCCGCCGCCC TCTATCTGTT GATCGCGCCA CGCAACCGCC AATACCACGA CATCAGCGGC
GAGTGCATCG CCGTCGACCA CAGCAGCCAT TAG
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| Protein sequence | MSSSLDLAPE QSVASTHPAS TLAGHQPDLV LSPRLHNRDL APTRMEGRRW GGYSIFALWT
NDVHNIANYS FAMGLFALGL GGWQILLSLA IGAVLVYFFM NLSGYMGQKT GVPFPVISRI
AFGIHGAQIP ALIRAVIAIA WFGIQTYLAS VVLRVLLTAV WPQMAAYDHD SILGLSSLGW
VCFVSIWLVQ LVILAYGMEM VRRYEAFAGP VILLTVAALA VFMYFKADAR IAWSVATPLA
GYEMWRNIFA GGALWLAIYG TLVLNFCDFA RSSPCRKTIR VGNFWGLPVN ILVFAVITVV
LCGAQFQING QIIDSPTQIV AAIPSTPFLV LGCLAFLIVT VAVNIMANFV APAFVLSNLA
PRHLNFRRAG LISATLAVLI LPWNLYNSPL VIVYFLSGLG ALLGPLYGVI MSDYWLLRKG
CINVPELYTE HPAGAYHYSK GINLHAVAAF VPAALLAIVL ALVPNFQGIA PFSWLIGAGI
AAALYLLIAP RNRQYHDISG ECIAVDHSSH
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