Gene Pput_1503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1503 
Symbol 
ID5195152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1689458 
End bp1689763 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content58% 
IMG OID640585973 
Productanti-sigma-factor antagonist 
Protein accessionYP_001266844 
Protein GI148546742 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.696241 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.186135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCG AGACTGATTT TTCGCAGGAC GGGAAAAAGC TGACCATCAA GATCAAGGGG 
CGCTTCGATT TCGGCAAGCA TCAGGAGTTT CGCGACGCCT ACGAACGCCA GCCCAGGCGC
CCGGATTCGG TGGTCGTCGA CCTGAAGGAC ACCACCTACC TCGACAGCTC CGCGCTGGGC
ATGCTGCTGT TGCTGCGCGA TCACGCGGGC GGCGACGAGT CGGATGTGCG GGTAGTGCAT
GCCAGCTCCG ACGTGCGCAA GATTCTCGCT ATCTCCAATT TCGAAAAACT CTTCGATATC
AGTTGA
 
Protein sequence
MAVETDFSQD GKKLTIKIKG RFDFGKHQEF RDAYERQPRR PDSVVVDLKD TTYLDSSALG 
MLLLLRDHAG GDESDVRVVH ASSDVRKILA ISNFEKLFDI S