| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1494 |
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| Symbol | |
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| ID | 5193461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1678868 |
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| End bp | 1680343 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585964 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001266835 |
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| Protein GI | 148546733 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.959617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGCGTG AAACCAAGAT TCTGCTGATC GATGACGACA GCGCGCGCCG CCGCGACCTT
GCGGTGGTGC TGAACTTCCT CGGCGAAGAA AACCTCGCAT GTGCCAGCCA TGACTGGCAG
CAGGCGGTCG AGCCATTGTC CTCGAGCCGC GAAGTGCTGT GCGTGCTCAT CGGCACCGTG
AATGCTCCGG GCAATCTGCT TGGGCTGCTT AAGACAGTGG CTACCTGGGA TGAGTTCCTT
CCGGTTCTGC TTTTAGGTGA AATTTCTTCT GCCGAGCTGC CGGAAGACCT TCGCCGCCGG
GTGCTGTCCA ACCTGGAAAT GCCGCCAAGC TACAGCCAGC TGCTGGATTC GCTGCACCGT
GCTCAGGTTT ACCGCGAAAT GTACGACCAG GCGCGCGAGC GCGGTCGCCA GCGCGAGCCC
AATCTGTTCC GTAGCCTGGT GGGCACCAGC CGTGCCATTC AGCACGTGCG GCAAATGATG
CAGCAAGTGG CGGATACCGA CGCCAGCGTG CTGATCCTGG GTGAGTCCGG CACCGGCAAG
GAAGTGGTGG CGCGCAACCT GCACTACCAT TCCAAGCGCC GTGAAGCGCC GTTCGTGCCG
GTCAACTGTG GCGCGATCCC GGCCGAGCTG CTGGAGAGCG AACTGTTCGG CCACGAGAAG
GGCGCCTTTA CCGGGGCCAT CACCAGCCGT GCCGGGCGTT TCGAGCTGGC CAACGGCGGT
ACCCTGTTCC TCGATGAAAT CGGCGACATG CCGTTACCGA TGCAGGTCAA GCTGCTGCGT
GTGCTGCAGG AGCGTACCTT CGAGCGCGTG GGTAGCAACA AGACCCAAAG CATCGACGTG
CGCATCATCG CTGCGACGCA CAAGAACCTC GAAACCATGA TCGAGGACGG CACCTTCCGC
GAAGACCTGT ACTACCGCCT GAACGTGTTC CCTATCGAAA TGGCACCGTT GCGTGAGCGG
GTGGAAGACA TCCCGTTGCT GATGAACGAG CTGATTTCGC GCATGGAGCA CGAGAAGCGC
GGTTCCATTC GCTTCAATTC CGCCTCGATC ATGTCGCTGT GTCGTCACGG CTGGCCGGGT
AACGTGCGCG AGCTGGCCAA CCTGGTCGAG CGCATGGCGA TCATGCACCC GTACGGGGTC
ATTGGCGTGT CGGAACTGCC GAAGAAATTC CGCTATGTCG ATGACGAAGA CGAGCAGATG
GTCGACAGCC TGCGCAGCGA CCTGGAAGAG CGCGTGGCGA TCAATGGCCA CACACCCAAT
TTCAGCAACC ACGCCATGCT GCCGCCCGAA GGCCTGGACC TCAAGGACTA CCTGGGTAGC
CTGGAGCAGG GCCTGATCCA GCAGGCGCTG GACGATGCCA ACGGTATCGT TGCGCGCGCG
GCTGAACGTT TGCGTATTCG CCGTACCACC CTGGTCGAGA AAATGCGCAA GTACGGCATG
AGCCGCCAGG GTGGCGAGGA ACAGGCCGAG GATTGA
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| Protein sequence | MWRETKILLI DDDSARRRDL AVVLNFLGEE NLACASHDWQ QAVEPLSSSR EVLCVLIGTV
NAPGNLLGLL KTVATWDEFL PVLLLGEISS AELPEDLRRR VLSNLEMPPS YSQLLDSLHR
AQVYREMYDQ ARERGRQREP NLFRSLVGTS RAIQHVRQMM QQVADTDASV LILGESGTGK
EVVARNLHYH SKRREAPFVP VNCGAIPAEL LESELFGHEK GAFTGAITSR AGRFELANGG
TLFLDEIGDM PLPMQVKLLR VLQERTFERV GSNKTQSIDV RIIAATHKNL ETMIEDGTFR
EDLYYRLNVF PIEMAPLRER VEDIPLLMNE LISRMEHEKR GSIRFNSASI MSLCRHGWPG
NVRELANLVE RMAIMHPYGV IGVSELPKKF RYVDDEDEQM VDSLRSDLEE RVAINGHTPN
FSNHAMLPPE GLDLKDYLGS LEQGLIQQAL DDANGIVARA AERLRIRRTT LVEKMRKYGM
SRQGGEEQAE D
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