| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1486 |
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| Symbol | |
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| ID | 5191735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1671730 |
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| End bp | 1672683 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640585956 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001266827 |
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| Protein GI | 148546725 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.645854 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.748991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TATTGACCGG CGGTACCGGC TTTTTTGGCA AGGCGCTGTT GCGCCACTGG
CTGGAAATCG CCGATGCAGG TTTGCAGGTG CCATCGGTAA CGGTATTGAG CCGGTCGCCA
GAGGCGTTTC TGACCCGGCA TCCTGAGTTT TCCGGCCTGG CGTGGCTGCA TCTGCACTGT
GGGGACATAC TGCAGCCCGC GTCCTTTCCT GAAGCAGCAG GCTTCACGCA TGTGTTGCAC
GCGGCAGCCG ATTCGACCGC CGGCGCGCAG CTCACGCCAT TGCAGCGCTA TATCCAGATC
GTCGATGGCA CCCGTCATGT GCTGGATTAT TCCGTCAGGC AACGTATCCC GCGCTTGTTG
ATGACCAGTT CCGGTGGCGT GTACGGCCCC CAGCCGCAGG GCATGGAGCA GATTCCCGAG
GATTACCATG GCTTGCCCGA CCCGTTGGAG CCTGCCCATG CCTATAGCGT TGCCAAGCGC
TGCGCCGAGC ATCTGGGCAT TTTGTACCAG CAGCAGTTTG GCCTGGAGGT GGTCATCGCC
CGCTGTTTCG CCTTCGTCGG CAGGGACCTG CCGCGCGATG TGCACTTCGC GATAGGCAAT
TTCATTCGCG ACGCCCTTGA ATCGAACGCC ATACGCGTCA GCGGGGATGG AACGCCTGTG
CGGTCTTACA TGGACCAGCG TGACCTGGCT CACTGGCTGG ATGTGATGCT GCGTCAAGGT
CGCGCGGGCA CTGCTTACAA CGTCGGGTCG GATAAGGCGG TGACGATCGC TGAGCTCGCT
CATCAGGTGC GTGACGTGCT GTCACCACAA AAACCTGTGC ACATCGCAGC TGCACAGGCT
GCCGTGGGGA GTTTCCGGAA CCGGTATGTG CCGTGCATCG ACAAGGCGCG CTCGGAGCTC
GGGTTGCAGT TGCGTCATGG CTTGCAGCAG TCGATCAAGG ACGCGGCGAT TTAG
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| Protein sequence | MNLLLTGGTG FFGKALLRHW LEIADAGLQV PSVTVLSRSP EAFLTRHPEF SGLAWLHLHC
GDILQPASFP EAAGFTHVLH AAADSTAGAQ LTPLQRYIQI VDGTRHVLDY SVRQRIPRLL
MTSSGGVYGP QPQGMEQIPE DYHGLPDPLE PAHAYSVAKR CAEHLGILYQ QQFGLEVVIA
RCFAFVGRDL PRDVHFAIGN FIRDALESNA IRVSGDGTPV RSYMDQRDLA HWLDVMLRQG
RAGTAYNVGS DKAVTIAELA HQVRDVLSPQ KPVHIAAAQA AVGSFRNRYV PCIDKARSEL
GLQLRHGLQQ SIKDAAI
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