| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1438 |
|---|
| Symbol | |
|---|
| ID | 5194776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1613097 |
|---|
| End bp | 1614446 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640585903 |
|---|
| Product | succinylarginine dihydrolase |
|---|
| Protein accession | YP_001266780 |
|---|
| Protein GI | 148546678 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3724] Succinylarginine dihydrolase |
|---|
| TIGRFAM ID | [TIGR03241] succinylarginine dihydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.531333 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCT ATGAAGTGAA TTTTGATGGC CTGGTGGGGC CTACCCACAA CTATGGCGGC
CTGTCTTACG GTAACGTGGC TTCGCAGAGC AACAGCCAGC AGGCGTCCAA CCCGCGTGAG
GCCGCGCGCC AGGGCCTGGC GAAGATGAAA GCGCTGGCCG ACATGGGCTT CAAGCAGGGT
GTTCTGGCGC CACAAGAGCG CCCGGACGTG GCGGCGCTGC GCCGCCTGGG GTTCAGTGGT
AGCGATGCCG ACGTTATCCA GCGCGCCGCC CGCGAGGCCA TGCCGTTGCT GGTGGCCAGT
TGCTCGGCCT CGAGCATGTG GGTGGCCAAC GCCGCGACAG TCAGCCCGAG TGCCGACACT
GCTGACGGTC GCGTGCACTT CACTGCCGCC AACCTCAACT GCAAATATCA CCGCAGCATC
GAACACCCGA CCACCAGCCG CGTGCTGGGT GCCATGTTCA ACAACGAGAA ACACTTTGCC
CACCACGCTG CGCTGCCTGC CGTGGCACAG TTCGGTGACG AGGGCGCGGC CAACCACACG
CGCTTCTGCC GCGCCTATGG CGAGGCTGGC GTGGAGTTTT TTGTCTACGG CCGCAGTGCC
TTCGACAGCC GTTACCCCGC GCCACAGAAG TACCCGGCCC GACAAACCCT GGAGGCCTCG
CAAGCTGTGG CCCGGCTGCA CGGCCTGAGC GATGACGGTG TGGTCTACGC TCAACAGAAC
CCGGCGGTGA TCGACCAGGG TGTGTTCCAC AATGATGTGA TTTCGGTCGG TAACGGCGAG
GTGCTGTTCT ACCACGAGGA AGCGTTTCTC GAGACCGACG CGGTACTTGG GCAACTGCGA
GCTAAACTGG CCAGCAAGGG TGGCAACTTC CAGGCCATCT GCGTGCCCAG GGCCGCGGTG
GCGGTGGAGG ACGCGGTGCG TTCCTACCTG TTCAACAGCC AGCTGCTCAG CCGCGACGAT
GGTTCCATGC TGCTGGTCGT GCCGGAAGAG TGCCGCAACA ACGAGCGGGT CTGGGCCTAT
CTGGGCCAGC TGACCAGCCA GGGAGGCCCG GTGAAGGAGG TCAAGGTATT CGACCTCAAG
CAAAGCATGC AAAACGGCGG CGGCCCGGCC TGCCTGCGTT TGCGCGTGGC TTTGAAAGAA
GCGGAACTGG CAGCCGTCAA CCAAGGCGTT ATCATGACGG CCCCGCTGTA TGACACGCTG
CTGCAGTGGG TCGACAGGCA CTACCGCGAT CGCCTTGGCG AAGCAGACCT GGCTGACCCG
CAACTGCTGG TGGAATGCCG TACGGCACTG GACGAATTGA CCCAGATCCT GAAGTTGGGC
TCGGTGTATC CGTTCCAACG CCAACCTTGA
|
|---|
| Protein sequence | MKSYEVNFDG LVGPTHNYGG LSYGNVASQS NSQQASNPRE AARQGLAKMK ALADMGFKQG
VLAPQERPDV AALRRLGFSG SDADVIQRAA REAMPLLVAS CSASSMWVAN AATVSPSADT
ADGRVHFTAA NLNCKYHRSI EHPTTSRVLG AMFNNEKHFA HHAALPAVAQ FGDEGAANHT
RFCRAYGEAG VEFFVYGRSA FDSRYPAPQK YPARQTLEAS QAVARLHGLS DDGVVYAQQN
PAVIDQGVFH NDVISVGNGE VLFYHEEAFL ETDAVLGQLR AKLASKGGNF QAICVPRAAV
AVEDAVRSYL FNSQLLSRDD GSMLLVVPEE CRNNERVWAY LGQLTSQGGP VKEVKVFDLK
QSMQNGGGPA CLRLRVALKE AELAAVNQGV IMTAPLYDTL LQWVDRHYRD RLGEADLADP
QLLVECRTAL DELTQILKLG SVYPFQRQP
|
|---|
| |