Gene Pput_1436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1436 
Symbol 
ID5191211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1610581 
End bp1611609 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID640585901 
Productarginine N-succinyltransferase 
Protein accessionYP_001266778 
Protein GI148546676 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3138] Arginine/ornithine N-succinyltransferase beta subunit 
TIGRFAM ID[TIGR03243] arginine and ornithine succinyltransferase subunits
[TIGR03244] arginine N-succinyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GTCCTGTACG CAGCAGCGAT TTGCCTGCGT TGATCGAATT GGCACGCAGC 
ACCGGCACCA CCGGGCTGAC CACGCTGCCG GCCAACGAAG AGCGCCTGGG GCATCGCGTT
GGTTGGGCGG AAAAAAGCTT TCGTGGCGAA GCCGAGCGTG GCGACACCGA TTACCTGTTC
GTGCTGGAAA ACGACGAAGG TCTGGTGGTG GGTATCAGTG CCATCGCCGG CGCCGTCGGC
CTGCGTGAGC CTTGGTACAA CTACCGGGTC GGCCTGACTG TCAGCGCCTC GCAGGAGCTG
AAGATCTACC GCGAAATCCC GACGCTGTTC CTGGCCAACG ACCTGACCGG CAACTCCGAG
CTGTGCTCGC TGTTCCTGCG TAGCGACTAC CGCTCGGGCC TCAATGGCCG CCTGCTGTCG
CGTGCGCGCA TGCTGTTCAT TGCCGAGTTC CCCGAGCTGT TCGGCAAGAA GATCATTGCC
GAAATGCGCG GCATGTCTGA CGAGCAGGGC CGTTCGCCGT TCTGGGAAAG CCTGGGCCGG
CATTTTTTCA AGATGGAGTT CAGCCAGGCC GATTACCTCA CCGGCGTGGG CAACAAGTCG
TTCATCGCCG AACTGATGCC CAAGTTCCCG CTGTACACCT GCTTCCTGTC CGAAGCGGCG
CGCAGTGTGA TCGGCCGTGT GCACAAAGAC ACCGAGCCGG CGCTGGCCAT GCTCAAGCAG
GAAGGCTTCA ACTACCAGGG CTACGTCGAC ATCTTCGATG CCGGCCCGGC CATCGAGTGT
GACACTGCCA AGATCCGCGC CGTGCGCGAG AGCCAGACCC TGGTGCTGGC GGTAGGTACG
CCAGGCGATG ACGCGACCCC TTTCATCATC CACAACCGCA AGCGCGACGA TTGCCGCATC
ACTGCTGCAC CTGCACGGTT GGCCGCCGGC ACCCTGGTGG TCGACCCGTT GACCGCCAAG
CGCCTGCGCA TGGGCGTCGG CGACAATGTC CGCGCGGTGC CGCTGTCGGC CAGCCGGGAG
GCCCAGTAA
 
Protein sequence
MIVRPVRSSD LPALIELARS TGTTGLTTLP ANEERLGHRV GWAEKSFRGE AERGDTDYLF 
VLENDEGLVV GISAIAGAVG LREPWYNYRV GLTVSASQEL KIYREIPTLF LANDLTGNSE
LCSLFLRSDY RSGLNGRLLS RARMLFIAEF PELFGKKIIA EMRGMSDEQG RSPFWESLGR
HFFKMEFSQA DYLTGVGNKS FIAELMPKFP LYTCFLSEAA RSVIGRVHKD TEPALAMLKQ
EGFNYQGYVD IFDAGPAIEC DTAKIRAVRE SQTLVLAVGT PGDDATPFII HNRKRDDCRI
TAAPARLAAG TLVVDPLTAK RLRMGVGDNV RAVPLSASRE AQ