| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1429 |
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| Symbol | |
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| ID | 5192546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1603618 |
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| End bp | 1604403 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585894 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001266771 |
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| Protein GI | 148546669 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0594365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TCGCACTGCT TGGCGCCCTG GCGCTGTCTG TGTTTTCCCT GGTGTCGCAG
GCTGATGAAA AACCGCTGAA AATCGGCATC GAAGCGGCCT ACCCACCCTT CGCTTTCAAG
CAACCTGACG GCAGCATCGC CGGCTTTGAC TACGATATCG GCAACGCGCT GTGCGAAGAG
ATGAAAACCA AGTGTACCTG GGTCGAGCAG GAGTTCGACG GCCTGATCCC GGCGCTGAAA
GTGCGCAAGA TCGACGCCAT CCTGTCGTCC ATGTCGATCA CCGATGACCG CAAGAAGTCG
GTCGACTTCA CCAAGCGCTA CTACCTGACT CCGGCGCGCC TGGTCATGAA GGACGGCACC
ACCGTCAGCG ACAGCCTGGA CGAACTGAAA GGCAAGAAGA TTGGTGTGCA GCGCGGCTCC
ATTCACGACC GCTTCGCCAA GGAAGTGCTG GGCGCCAAAG GTGCCACCGT GGTGCCTTAC
GGCACCCAGA ACGAAATCTA CCTGGACGTC GCAGCTGGCC GCCTCGACGG CACCGTGGCG
GATGCCACCC TGCTGGAAGA CGGCTTCCTC AAGACTGACG CCGGCAAGGG CTTCGCGTTC
GTAGGCCCGG CCTTCACCGA CGCCAAGTAC TTCGGTGACG GTATCGGTAT TGCCGTACGC
AAGGGTGACA AGGCCAATGT CGACCGCATC AACGCGGCGA TCGACGCCAT CCGTGCCAAC
GGCAAGTACA AAGAAATCGA AAGCAAGTAC TTCAATTTCG ACATCTACGG TCCAGACTCG
AAGTAA
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| Protein sequence | MKKLALLGAL ALSVFSLVSQ ADEKPLKIGI EAAYPPFAFK QPDGSIAGFD YDIGNALCEE
MKTKCTWVEQ EFDGLIPALK VRKIDAILSS MSITDDRKKS VDFTKRYYLT PARLVMKDGT
TVSDSLDELK GKKIGVQRGS IHDRFAKEVL GAKGATVVPY GTQNEIYLDV AAGRLDGTVA
DATLLEDGFL KTDAGKGFAF VGPAFTDAKY FGDGIGIAVR KGDKANVDRI NAAIDAIRAN
GKYKEIESKY FNFDIYGPDS K
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