| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1419 |
|---|
| Symbol | |
|---|
| ID | 5192439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1586882 |
|---|
| End bp | 1589902 |
|---|
| Gene Length | 3021 bp |
|---|
| Protein Length | 1006 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640585884 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_001266761 |
|---|
| Protein GI | 148546659 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase
[COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.184545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCC AGCTGTCCAC CGTTGCACCG AGCGCCAATT ACCCCGAATT CCTCGAAGCC
CTGCGCAACA GCGGCTTCCG TGGCCAGATC AGTGCCGACT ACGCAACCCG CACGGTACTG
GCCACCGACA ACTCGATCTA CCAGCGCTTG CCGCAGGCGG CGGTGTTCCC GCTGGATGCC
GACGATGTGG CGCGGGTCGC CACGCTAATG GGTGAACCGC GCTTCCAGCA GGTCAAGCTG
ACCCCCCGCG GTGGTGGCAC CGGCACCAAC GGCCAGTCGC TGACCGACGG TATCGTCGTC
GACCTGTCGC GGCACATGAA CAACATTCTT GAAATCAACG TGCAAGAGCG CTGGGTGCGG
GTACAGGCCG GCACGGTCAA GGACCAGCTC AATGCTGCGC TCAAGCCGCA CGGGCTGTTC
TTCGCTCCTG AGCTGTCCAC CTCCAACCGC GCCACGGTCG GCGGCATGAT CAACACGGAT
GCCAGTGGCC AGGGCAGTTG CACCTACGGC AAAACCCGCG ACCACGTGCT GGAGCTGCAC
AGTGTGCTGC TCGGTGGCGA ACGCCTGCAC AGCCTGCCGA TCGACGATGC TGCGCTGGAG
CAGGCCTGCG CCGCGCCGGG CCGGGTCGGC GAGGTGTACC GCATGGCCCG GGAAATTCAG
GAAACCCAGG CCGAACTGAT TGAAACCACC TTTCCCAAGC TCAACCGTTG CCTGACCGGC
TACGACCTGG CGCACCTGCG CGACGAGCAG GGTCGCTTCA ACCTCAACAG CGTGCTGTGC
GGCGCCGAGG GCTCGCTGGG CTATGTGGTC GAAGCCAAGC TCAACGTGCT GCCGATTCCC
AAATATGCGG TGCTGGTCAA TGTGCGTTAC ACCAGCTTCA TGGATGCGCT GCGTGATGCC
AACGCGCTGA TGGCGCACAA GCCGCTGTCG ATCGAGACGG TCGACTCCAA GGTGCTGATG
CTGGCGATGA AAGACATCGT CTGGCACAGC GTGGCCGAGT ATTTCCCGGC GGACCCCGAG
CGCCCCACGC TGGGCATCAA CCTGGTGGAG TTCTGCGGCG ACGAGCCGGC CGAGGTCAAC
GCCAAGGTGC AGGCATTCAT CCAGCACCTG CAAAGCGACA CCAGCGTCGA GCGCCTGGGC
CACACCTTGG CCGAAGGTGC CGAGGCAGTC ACCCGCGTCT ATACCATGCG CAAGCGTTCG
GTGGGCCTGC TGGGCAACGT CGAAGGCGAA GTGCGCCCGC AGCCGTTCGT GGAGGACACC
GCGGTACCGC CAGAGCAGTT GGCCGACTAC ATCGCCGACT TCCGCGCACT GCTCGACGGC
TACGGCCTGG CCTACGGCAT GTTTGGCCAC GTCGATGCCG GCGTGCTGCA TGTGCGCCCG
GCACTGGACA TGAAGGACCC GGCGCAGGCC GCGCTGGTCA AGCCGATTTC CGACGCTGTT
GCCGCGCTGA CCAAGCGTTA TGGCGGCCTG CTGTGGGGTG AGCACGGCAA GGGCCTGCGC
TCGGAATACG TGCCTGAGTA CTTCGGCGAG CTGTACCCGG CGTTGCAGCG CCTGAAGGGC
GCCTTTGACC CGCACAACCA GCTCAACCCG GGCAAGATCT GCACGCCACT GGGCAGCGCC
GAGGGCCTTA CCCCGGTCGA TGGCGTGACC CTGCGCGGCG ACCTTGACCG TACCATTGAC
GAGCGCGTAT GGCAGGACTT CCCCAGCGCC GTGCACTGCA ACGGCAATGG CGCCTGTTAC
AACTATGACC CCAACGACGC CATGTGCCCG TCGTGGAAGG CTACCCGCGA ACGCCAGCAT
TCGCCCAAGG GCCGCGCCTC GCTGATGCGC GAGTGGCTGC GCCTGCAGGG CGAGGCGAAC
ATCGATGTGC TGGCTGCGGC GCGCAACAAG GTGTCGTGGC TCAAGGGCCT GCCGGCGCGT
CTGCGCAACA ACCGCGCGCG CCACCAGGGC CAGGAGGACT TCTCCCATGA AGTGTACGAC
GCCATGGCCG GCTGCCTGGC GTGCAAGTCG TGCGCCGGGC AGTGCCCGAT CAAGGTCAAT
GTGCCGGACT TCCGCTCGCG CTTCCTCGAG CTGTACCACG GTCGCTACCA GCGCCCGCTG
CGTGACTACC TGATCGGCTC GCTCGAGTTC ACCATCCCCT ACCTGGCGCA CGCACCGGGG
CTGTACAACG CGGTGATGGG TTCGAAGTGG GTGAGCCAAC TGCTGGCCGA CAAGGTGGGC
ATGGTCGACA GCCCGCTGAT CAGCCGCTTC AACTTCCAGG CTACCCTGAC CCGTTGCCGC
GTTGGCATGG CCACGGTGCC GGCCCTGCGC GAGCTGACCC CGGCCCAGCG CGAGCGCAGC
ATCGTGCTGG TGCAGGACGC CTTCACCCGC TACTTCGAAA CACCGCTGCT GTCGGCCTTC
ATCGACCTTG CCCACCGCCT GGGTCACCGG GTATTCCTGG CGCCGTACAG CGCCAACGGC
AAGCCGTTGC ACGTACAGGG TTTCCTTGGC GCGTTTGCCA AGGCAGCGAT CCGCAACGCC
ACGCAGCTCA AGGCCCTGGC CGATTGCGGT GTGCCGCTGG TGGGGCTGGA CCCGGCGATG
ACGCTGGTGT ATCGCCAGGA GTACCAGAAG GTGCCAGGCC TGGAGGGTTG TCCGCAGGTG
TTGCTGCCGC AGGAATGGTT GATGGATGTA CTGCCCGAGC AGGCGCCTAC CGCACCGGGC
AGCTTCCGCC TGATGGCGCA CTGCACCGAG AAGACCAACG TGCCGGCCAG CACCCGGCAG
TGGGAGCAGG TGTTCGCCCG TCTGGGGCTG AAGCTGGTGA CCGAGGCCAC GGGTTGCTGC
GGTATGTCCG GTACCTATGG GCACGAAGCC CGCAACCAGG AAACCTCGCG GGCCATATTC
GAGCAGAGCT GGGCGACCAA GCTGGACAAG GAAGGGGAGC CGCTGGCGAC CGGTTACTCG
TGCCGTAGCC AGGTCAAGCG CATGACCGAG CGGAAGATGC GCCACCCGCT TGAGGTGGTG
TTGCAGTACG CTCAGCGCTA A
|
|---|
| Protein sequence | MIAQLSTVAP SANYPEFLEA LRNSGFRGQI SADYATRTVL ATDNSIYQRL PQAAVFPLDA
DDVARVATLM GEPRFQQVKL TPRGGGTGTN GQSLTDGIVV DLSRHMNNIL EINVQERWVR
VQAGTVKDQL NAALKPHGLF FAPELSTSNR ATVGGMINTD ASGQGSCTYG KTRDHVLELH
SVLLGGERLH SLPIDDAALE QACAAPGRVG EVYRMAREIQ ETQAELIETT FPKLNRCLTG
YDLAHLRDEQ GRFNLNSVLC GAEGSLGYVV EAKLNVLPIP KYAVLVNVRY TSFMDALRDA
NALMAHKPLS IETVDSKVLM LAMKDIVWHS VAEYFPADPE RPTLGINLVE FCGDEPAEVN
AKVQAFIQHL QSDTSVERLG HTLAEGAEAV TRVYTMRKRS VGLLGNVEGE VRPQPFVEDT
AVPPEQLADY IADFRALLDG YGLAYGMFGH VDAGVLHVRP ALDMKDPAQA ALVKPISDAV
AALTKRYGGL LWGEHGKGLR SEYVPEYFGE LYPALQRLKG AFDPHNQLNP GKICTPLGSA
EGLTPVDGVT LRGDLDRTID ERVWQDFPSA VHCNGNGACY NYDPNDAMCP SWKATRERQH
SPKGRASLMR EWLRLQGEAN IDVLAAARNK VSWLKGLPAR LRNNRARHQG QEDFSHEVYD
AMAGCLACKS CAGQCPIKVN VPDFRSRFLE LYHGRYQRPL RDYLIGSLEF TIPYLAHAPG
LYNAVMGSKW VSQLLADKVG MVDSPLISRF NFQATLTRCR VGMATVPALR ELTPAQRERS
IVLVQDAFTR YFETPLLSAF IDLAHRLGHR VFLAPYSANG KPLHVQGFLG AFAKAAIRNA
TQLKALADCG VPLVGLDPAM TLVYRQEYQK VPGLEGCPQV LLPQEWLMDV LPEQAPTAPG
SFRLMAHCTE KTNVPASTRQ WEQVFARLGL KLVTEATGCC GMSGTYGHEA RNQETSRAIF
EQSWATKLDK EGEPLATGYS CRSQVKRMTE RKMRHPLEVV LQYAQR
|
|---|
| |