Gene Pput_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1402 
Symbol 
ID5194246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1571533 
End bp1571844 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content59% 
IMG OID640585867 
Producthypothetical protein 
Protein accessionYP_001266744 
Protein GI148546642 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.021446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.593041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCA CAGCGCAGTT TCGCAGTTTT GCCGAGTTCT ATCCGTACTA TCTGGGGGAG 
CACAGCAACC CCACCTGCCG CCGCCTGCAC TTCGTCGGCA CCAGCCTGGT GATAGCGCTG
CTGGCCTACA CCATTGGCAG TGGCAAATGG TTGCTGCTGC TGGCCGTGCC GGTGTTCGGC
TATGGCTTTG CCTGGGTCGG GCACTTCTTT TTCGAGAAGA ATCGGCCAGC GACCTTTACC
TATCCGCTGT ACAGCCTGGC CGGGGATTTC GTGATGTTCC GGGATATCCT GCTGGGCAAG
CTCAGGCTGT AA
 
Protein sequence
MNSTAQFRSF AEFYPYYLGE HSNPTCRRLH FVGTSLVIAL LAYTIGSGKW LLLLAVPVFG 
YGFAWVGHFF FEKNRPATFT YPLYSLAGDF VMFRDILLGK LRL