Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1402 |
Symbol | |
ID | 5194246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1571533 |
End bp | 1571844 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640585867 |
Product | hypothetical protein |
Protein accession | YP_001266744 |
Protein GI | 148546642 |
COG category | [S] Function unknown |
COG ID | [COG4323] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.021446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.593041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACAGCA CAGCGCAGTT TCGCAGTTTT GCCGAGTTCT ATCCGTACTA TCTGGGGGAG CACAGCAACC CCACCTGCCG CCGCCTGCAC TTCGTCGGCA CCAGCCTGGT GATAGCGCTG CTGGCCTACA CCATTGGCAG TGGCAAATGG TTGCTGCTGC TGGCCGTGCC GGTGTTCGGC TATGGCTTTG CCTGGGTCGG GCACTTCTTT TTCGAGAAGA ATCGGCCAGC GACCTTTACC TATCCGCTGT ACAGCCTGGC CGGGGATTTC GTGATGTTCC GGGATATCCT GCTGGGCAAG CTCAGGCTGT AA
|
Protein sequence | MNSTAQFRSF AEFYPYYLGE HSNPTCRRLH FVGTSLVIAL LAYTIGSGKW LLLLAVPVFG YGFAWVGHFF FEKNRPATFT YPLYSLAGDF VMFRDILLGK LRL
|
| |