| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1374 |
|---|
| Symbol | |
|---|
| ID | 5194119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 1543706 |
|---|
| End bp | 1544902 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640585839 |
|---|
| Product | transposase, mutator type |
|---|
| Protein accession | YP_001266716 |
|---|
| Protein GI | 148546614 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.981282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CCACTATCGC ATTGACCGAG TTGGTTGAGA AAGGGGCAGA CGCTGATCTG
CTCAAGCAAA TGATCCAGTT CGTTGCCCAG CGCATGATGG AATTCGATGT CGAAGGCCTG
TGCGGTGCGG GCTTCGATGT CAAAAGCCCT GACCGGACAA ACAGCCGCAA TGGCTACCGT
GATCGCTTGT GGCAGACCCG CGCCGGCGAC GTCGACCTGA AGATTCCCAA ACTGCGCCAG
GGCAACTACT TTCCTGGCTT CCTCGAACCT CGACGCACCG CCGAAAAGGC CATGGCGGCG
GTGATTCAGG AGGCTTATAT CCAAGGCGTT TCAACACGCT CGGTGGACGA GCTGGTGAAG
GCCATGGGCA TGACTGGTAT TTCTAAAAGC CAGGTGTCAC GGCTAGCTGG TGAGATCGAT
GAGCGCGTTC ACGCTTTCCT TGATCGCCCG CTTGAAGGTG ACTGGCCCTA TCTCTGGATC
GATGCCACCT ACGTCAAGGT GCGGGAGGCC GGGCGCATCG TCTCGGTCGT CGTAATAATC
GCCGTGGCCG TGAACACCGA CGGTGGCCGC GAAGTCCTGG GCATGCGGGT TGGGCCGTCA
GAGGCTGAGC CGTTCTGGAC AGACTTCCTG CGCAGCCTCA TGCGACGTGG CTTGCGGGGC
GTGAAGCTGG TCATCTCCGA CGCCCACGAA GGGCTCAAGG CGGCTGCTTC TAAGGTCTTC
AACGCGACTT GGCAGCGCTG CCGTGTGCAC TTCATGCGCA ACGCCATGGC CCATGTCGGC
AAGGGCCAGC GCACCATGGT AGCGGCGCTG CTGCGCACGG TCTTCGCCCA GGACAGCCGT
GCCGAATGCC ATCAGCAATG GCGCTTGGTC GCTGATCAAC TGCGCGAAAA ATACCCCAAG
ATCGCGACAC TCATGGACGG CTGCGAGGAT GAAGTGCTGG CTCACATGGC GTTTCCAAAA
GCCCACCGAC AGCAGTTACA CAGCACCAAC CCGCTTGAAC GGCTCAACGC TGAAATCAAA
CGCCGCACCG ATGTCGTGGG GATTTTTCCC AACGATCCGG CCATCACACG GCTGGTAGGC
GCGATGCTGC TGGAGCAGAA CGACGAGTGG TGCCTGCAAA GACGCTACAT GCAGTTGGAG
GCCTTCGAAG CGGTCAGCGA TAATCCACAG GCCAAGCTGT CGGCCGTGAT CAACTAA
|
|---|
| Protein sequence | MTKPTIALTE LVEKGADADL LKQMIQFVAQ RMMEFDVEGL CGAGFDVKSP DRTNSRNGYR
DRLWQTRAGD VDLKIPKLRQ GNYFPGFLEP RRTAEKAMAA VIQEAYIQGV STRSVDELVK
AMGMTGISKS QVSRLAGEID ERVHAFLDRP LEGDWPYLWI DATYVKVREA GRIVSVVVII
AVAVNTDGGR EVLGMRVGPS EAEPFWTDFL RSLMRRGLRG VKLVISDAHE GLKAAASKVF
NATWQRCRVH FMRNAMAHVG KGQRTMVAAL LRTVFAQDSR AECHQQWRLV ADQLREKYPK
IATLMDGCED EVLAHMAFPK AHRQQLHSTN PLERLNAEIK RRTDVVGIFP NDPAITRLVG
AMLLEQNDEW CLQRRYMQLE AFEAVSDNPQ AKLSAVIN
|
|---|
| |