Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1371 |
Symbol | |
ID | 5193385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1541460 |
End bp | 1542251 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640585836 |
Product | hypothetical protein |
Protein accession | YP_001266713 |
Protein GI | 148546611 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTAG AAATGCCAAA ACGCACGATC TCCCATCGAG TAGGCAGCCA AGGTGAAGTA TTAGTTGAAA ATGCTTTTGC TGATAAAGGC TGGCTTTATC GAAGGCTGGA GAAAGATAAA GACTACGGAA TAGACGGAGA GGTTGAGATT TTCGATGCTG ATGGGAGTGC AACGGGGATA ATTTTCAAGG TTCAGATCAA AAGCTCACGA AAGCACTCGC CTAACATTAG GTTGAAGCGA AGTACAAAAA ACTATCTTTC AGTCTGTCCA CTACCTGTAA TTCTGATTTC TGTTGAGGTA TCTACAGGTT CAATTCGTTT CGCTTCAATT GATCAGGGGC GGATTGCGGC GAATGGAGCG GGTTATAGCG ATTTTCAAGA GTTGGATGAT GAAGCCTTCG GCGAATTGGA GGATATTGCT GCTGAACACT GTGCAGGGTG CTTATCGGTG CGTGATTATA CGCTCTACAA CGCTCCGGCT CAGCTCATTA GGTGTTTAGA TCTGTTATTG AATTTCGGCG GCGATGTAGA TTCCATGACG AAGTGGCTAA GGTTTTTTGC CCCCGACGAT GTACTGGCTT CATCATATGG TTACGCAGCT TTCCTCAAGG AGCAGATGGA CTATGACAAA AACTTGTTGC CGAAACTCCG CGCCTGGGTA TTAGAGTTTT TTCCTGAGGA ACAACAAAGA ATCGACCATG CGATGGAAGC CTATGCACGA GGTGAGTTGG TTGGAAGGCG AGCAGAGGTT TATGCTGTTA TGCAAGGCCC GATATTTTCA AATTTAGGCT GA
|
Protein sequence | MSVEMPKRTI SHRVGSQGEV LVENAFADKG WLYRRLEKDK DYGIDGEVEI FDADGSATGI IFKVQIKSSR KHSPNIRLKR STKNYLSVCP LPVILISVEV STGSIRFASI DQGRIAANGA GYSDFQELDD EAFGELEDIA AEHCAGCLSV RDYTLYNAPA QLIRCLDLLL NFGGDVDSMT KWLRFFAPDD VLASSYGYAA FLKEQMDYDK NLLPKLRAWV LEFFPEEQQR IDHAMEAYAR GELVGRRAEV YAVMQGPIFS NLG
|
| |