Gene Pput_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1371 
Symbol 
ID5193385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1541460 
End bp1542251 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content46% 
IMG OID640585836 
Producthypothetical protein 
Protein accessionYP_001266713 
Protein GI148546611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAG AAATGCCAAA ACGCACGATC TCCCATCGAG TAGGCAGCCA AGGTGAAGTA 
TTAGTTGAAA ATGCTTTTGC TGATAAAGGC TGGCTTTATC GAAGGCTGGA GAAAGATAAA
GACTACGGAA TAGACGGAGA GGTTGAGATT TTCGATGCTG ATGGGAGTGC AACGGGGATA
ATTTTCAAGG TTCAGATCAA AAGCTCACGA AAGCACTCGC CTAACATTAG GTTGAAGCGA
AGTACAAAAA ACTATCTTTC AGTCTGTCCA CTACCTGTAA TTCTGATTTC TGTTGAGGTA
TCTACAGGTT CAATTCGTTT CGCTTCAATT GATCAGGGGC GGATTGCGGC GAATGGAGCG
GGTTATAGCG ATTTTCAAGA GTTGGATGAT GAAGCCTTCG GCGAATTGGA GGATATTGCT
GCTGAACACT GTGCAGGGTG CTTATCGGTG CGTGATTATA CGCTCTACAA CGCTCCGGCT
CAGCTCATTA GGTGTTTAGA TCTGTTATTG AATTTCGGCG GCGATGTAGA TTCCATGACG
AAGTGGCTAA GGTTTTTTGC CCCCGACGAT GTACTGGCTT CATCATATGG TTACGCAGCT
TTCCTCAAGG AGCAGATGGA CTATGACAAA AACTTGTTGC CGAAACTCCG CGCCTGGGTA
TTAGAGTTTT TTCCTGAGGA ACAACAAAGA ATCGACCATG CGATGGAAGC CTATGCACGA
GGTGAGTTGG TTGGAAGGCG AGCAGAGGTT TATGCTGTTA TGCAAGGCCC GATATTTTCA
AATTTAGGCT GA
 
Protein sequence
MSVEMPKRTI SHRVGSQGEV LVENAFADKG WLYRRLEKDK DYGIDGEVEI FDADGSATGI 
IFKVQIKSSR KHSPNIRLKR STKNYLSVCP LPVILISVEV STGSIRFASI DQGRIAANGA
GYSDFQELDD EAFGELEDIA AEHCAGCLSV RDYTLYNAPA QLIRCLDLLL NFGGDVDSMT
KWLRFFAPDD VLASSYGYAA FLKEQMDYDK NLLPKLRAWV LEFFPEEQQR IDHAMEAYAR
GELVGRRAEV YAVMQGPIFS NLG