| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1326 |
|---|
| Symbol | |
|---|
| ID | 5194342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1493951 |
|---|
| End bp | 1494787 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640585793 |
|---|
| Product | RNA-binding S1 domain-containing protein |
|---|
| Protein accession | YP_001266670 |
|---|
| Protein GI | 148546568 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2996] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.401715 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTGC TTGGGCGTTA CAACAGTTTG CAAATCGTGA AACACGTGGA CTTCGGTCTG
TACCTGGACG GCGGCGCCGA TGGCGAAATC CTGCTGCCCG GGCGCTACAT CCCGAAAAAC
GCCGAGACCG AGGTCGATGA CTGGTTGAAC GTGTTCATCT ACCTGGACAG CGAAGACCAG
CTGATCGCCA CCACCGAGAA GCCCAAGGTG CAGGTCGGCG AGTTCGCCAG CCTGAAGGTC
AAGGACATCA ACGGTGCCGG TATCTTCCTG GACTGGGGCC TGTCCAAGGA CTTGCTGATG
CCGTACTCGG AAGAGGCTCG GCCGCTGAAG ATCGGTGATT ACTGCGTGGT GCACGTGTAC
CTCGACAAGC GCACCCGCCG GATCACTGCC ACGTCGCGCC TGGACCGCTA CCTCGATGTC
ACCCCGGCCG ACTACAAGGT TGGCCAGCCG GTCGAACTGC TGGTGGCCGG CGAGACGCCG
ATGGGCTTCA AGGCCATCAT CAACAACCGC CACTGGGGCC TGATCCACAA GAACGAGGTG
TTCAAGTTCT TGCGCTCGGG CATGCACGAG AAGGGCTTCA TCAAGGAAGT GCGCCAGGAC
GGCAAGCTTT CACTGAGCCT GCAGCCAGTA GGCGCCGCCC TGGCGGACAC CCTGCAAGAG
CAGATCTTGG CGCGCCTGGA AGCCGAAGGC GGGGTGTTGG GGGTGTGCGA CAAGAGTGAC
CCTGCGTTGA TCAGCAAGCT GTTCAACGTC AGCAAGGGCA ACTTCAAGAA GGCCATTGGC
GGGTTGTTCA AGCAGGGCCT GATCGTCATC CATGACGATC GCATCGAGAA AGCCTGA
|
|---|
| Protein sequence | MALLGRYNSL QIVKHVDFGL YLDGGADGEI LLPGRYIPKN AETEVDDWLN VFIYLDSEDQ
LIATTEKPKV QVGEFASLKV KDINGAGIFL DWGLSKDLLM PYSEEARPLK IGDYCVVHVY
LDKRTRRITA TSRLDRYLDV TPADYKVGQP VELLVAGETP MGFKAIINNR HWGLIHKNEV
FKFLRSGMHE KGFIKEVRQD GKLSLSLQPV GAALADTLQE QILARLEAEG GVLGVCDKSD
PALISKLFNV SKGNFKKAIG GLFKQGLIVI HDDRIEKA
|
|---|
| |