Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1319 |
Symbol | |
ID | 5191754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1487417 |
End bp | 1488352 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640585786 |
Product | aspartyl/asparaginyl beta-hydroxylase |
Protein accession | YP_001266663 |
Protein GI | 148546561 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTTT CCTTTGCAGC CAAGGCGGGT GTCTTGCTGG TGTTTTTCGG CAGCGTGCTG TTCGTGCACT TGCGCGGCAA GGCCCGCCTG CCGGTGTTGC GCCAGTTCGT CAACCATTCG GCGCTGTTCG CCCCCTACAA CGCGTTGATG TACCTGTTTT CCGGCGTGCC GTCCAAGCCC TACCTGGATC GCCAGCGCTT CCCCGAGCTG GACGTGTTGA AGGACAACTG GCAGGAAATC CGCGAAGAGG CCATGCGCCT GTTCGACGAA GGCTATATCC GTGCCGCTGA GAAAGATAAC GACGCCGGCT TCGGTTCGTT CTTCAAGAAA GGCTGGAAGC GCTTTTACCT GAAGTGGTAC GACAAACCCC TGCCTTCGGC GCAAACCCTG TGCCCGCGCA CTGTCGAGCT GGTCAGCCGC ATCCCCAATG TCAAAGGCGC AATGTTTGCC CTGCTGCCCG GCGGCAGCCA CCTGAACCCG CACCGCGACC CGTTCGCAGG CTCGCTGCGT TATCACCTGG GGCTGTCCAC GCCCAACTCC GACGCATGCC GCATCTACGT GGACGGTGAG CAGTACGCCT GGCGTGACGG CGAAGACGTG ATGTTCGACG AAACCTACGT GCACTGGGTC AAGAACGAAA CCGACGTAAC CCGCGTGATC CTGTTCTGTG ACATCGAGCG CCCGCTGAGT AGCCCGCTGA TGACGCGCAT CAACCGTAAG GTCAGTGCCT TCCTCGGCCG CGCCACCGCG CCGCAGAACA CCGACGACGA GCGCGTGGGC GGGATCAACC AGGCGTACGC CTGGAGCAAG CGCTTCAGCA ACAGGATCAG CAGCCATGTG AAGCAGTTCA AGCGCGCCAA CCCCAAGGCT TACCGCGTGC TGCGGCCGGT ACTGGCGGTA GTGGTGGCGT ATCTGTTGTA TCGCTGGTTG TTCTGA
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Protein sequence | MTFSFAAKAG VLLVFFGSVL FVHLRGKARL PVLRQFVNHS ALFAPYNALM YLFSGVPSKP YLDRQRFPEL DVLKDNWQEI REEAMRLFDE GYIRAAEKDN DAGFGSFFKK GWKRFYLKWY DKPLPSAQTL CPRTVELVSR IPNVKGAMFA LLPGGSHLNP HRDPFAGSLR YHLGLSTPNS DACRIYVDGE QYAWRDGEDV MFDETYVHWV KNETDVTRVI LFCDIERPLS SPLMTRINRK VSAFLGRATA PQNTDDERVG GINQAYAWSK RFSNRISSHV KQFKRANPKA YRVLRPVLAV VVAYLLYRWL F
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