Gene Pput_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1319 
Symbol 
ID5191754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1487417 
End bp1488352 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID640585786 
Productaspartyl/asparaginyl beta-hydroxylase 
Protein accessionYP_001266663 
Protein GI148546561 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTTT CCTTTGCAGC CAAGGCGGGT GTCTTGCTGG TGTTTTTCGG CAGCGTGCTG 
TTCGTGCACT TGCGCGGCAA GGCCCGCCTG CCGGTGTTGC GCCAGTTCGT CAACCATTCG
GCGCTGTTCG CCCCCTACAA CGCGTTGATG TACCTGTTTT CCGGCGTGCC GTCCAAGCCC
TACCTGGATC GCCAGCGCTT CCCCGAGCTG GACGTGTTGA AGGACAACTG GCAGGAAATC
CGCGAAGAGG CCATGCGCCT GTTCGACGAA GGCTATATCC GTGCCGCTGA GAAAGATAAC
GACGCCGGCT TCGGTTCGTT CTTCAAGAAA GGCTGGAAGC GCTTTTACCT GAAGTGGTAC
GACAAACCCC TGCCTTCGGC GCAAACCCTG TGCCCGCGCA CTGTCGAGCT GGTCAGCCGC
ATCCCCAATG TCAAAGGCGC AATGTTTGCC CTGCTGCCCG GCGGCAGCCA CCTGAACCCG
CACCGCGACC CGTTCGCAGG CTCGCTGCGT TATCACCTGG GGCTGTCCAC GCCCAACTCC
GACGCATGCC GCATCTACGT GGACGGTGAG CAGTACGCCT GGCGTGACGG CGAAGACGTG
ATGTTCGACG AAACCTACGT GCACTGGGTC AAGAACGAAA CCGACGTAAC CCGCGTGATC
CTGTTCTGTG ACATCGAGCG CCCGCTGAGT AGCCCGCTGA TGACGCGCAT CAACCGTAAG
GTCAGTGCCT TCCTCGGCCG CGCCACCGCG CCGCAGAACA CCGACGACGA GCGCGTGGGC
GGGATCAACC AGGCGTACGC CTGGAGCAAG CGCTTCAGCA ACAGGATCAG CAGCCATGTG
AAGCAGTTCA AGCGCGCCAA CCCCAAGGCT TACCGCGTGC TGCGGCCGGT ACTGGCGGTA
GTGGTGGCGT ATCTGTTGTA TCGCTGGTTG TTCTGA
 
Protein sequence
MTFSFAAKAG VLLVFFGSVL FVHLRGKARL PVLRQFVNHS ALFAPYNALM YLFSGVPSKP 
YLDRQRFPEL DVLKDNWQEI REEAMRLFDE GYIRAAEKDN DAGFGSFFKK GWKRFYLKWY
DKPLPSAQTL CPRTVELVSR IPNVKGAMFA LLPGGSHLNP HRDPFAGSLR YHLGLSTPNS
DACRIYVDGE QYAWRDGEDV MFDETYVHWV KNETDVTRVI LFCDIERPLS SPLMTRINRK
VSAFLGRATA PQNTDDERVG GINQAYAWSK RFSNRISSHV KQFKRANPKA YRVLRPVLAV
VVAYLLYRWL F