Gene Pput_1317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1317 
Symbol 
ID5191546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1485063 
End bp1486136 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content61% 
IMG OID640585784 
Producthypothetical protein 
Protein accessionYP_001266661 
Protein GI148546559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.828005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC GCTATCGCTG GCCGCTGGTC GGCCTGGCCA GCCTGATCGT GCTGCTGGTA 
GCGCTGCACC TGGCCCTGCC CTACCTGGTG CGCGACTACC TCAACGACAA GCTGGCCGAC
ATGGGTGACT ACCGCGGCCA GGTAGCCGAT GTGGACCTGG CCTGGTGGCG CGGTGCCTAT
CAGATAAACG GGCTGAAAAT CGTCAAGACC ACCGGCAAGG TGCCCGTACC GTTTCTCGAC
GCCCCACTGA TCGACCTCTC GGTGAGCTGG CATGCGTTGT GGTACGACAA GGCAGTGGTG
GCGGAGGTGA CCTTCGTGCA TCCCGAGCTG AACTTTGTCG ACGGTGGTAG CAAACAGGCG
TCGCAGACCG GCCAAGGTAC CGACTGGCGC CAGCAGCTGG AAAAACTCCT GCCCATCACC
CTCAACGAAG TGCGTATCGA CAATGGCGTG CTGACGTTCC GCAACTTCAA TTCCAAGCCA
CCGGTCGACC TCAAGGCCAC CCGGTTGAAC GCCAGCATCC GCAACCTGAC CAACGTGCGC
GACCAGAAAG GCCGTCGCGA CGCAAGTTTC GAAGGCACGG CGCTCATCGC GGGGGATGCG
AACGTAGAAA GCCGTGCCAC CTTCGACCCT TTCAGTGATT TCGACGACTT CGAATTCAGG
CTTCGCGCCA CCGGCATCGA GCTGCGCAAA CTGAATGACT TTGCCAGCGC CTACGGCAAA
TTCGACTTCA ATGCCGGGCA CGGTGACGTG GTCATCGAGG CCCAGGCAGA AAACGGCCGG
CTGAACGGCT ATATAAAACC GCTGCTGCGT GATGTCGACG TGTTCGACTG GCAACAGGAC
GTCGAGGAAA AGGACAAGGG TTTCTTCCGC TCGGTGTGGG AGGCCTTGGT GGGGGCGACC
GAGACGGTGC TGAAGAACCA GCCGAAAAAC CAGTTCGCTA CCCGGGTGGA GCTCAGCGGC
AGTGTGCGCA AACAGGATGT CAGTGCCTTC GAGGCGTTCT TGCAGATCCT GCGCAACGGG
TTTGTCCAGG CATTCAATGC GCGCTATGAG CAACCAGCGC CGAAGTCTGA CTGA
 
Protein sequence
MKARYRWPLV GLASLIVLLV ALHLALPYLV RDYLNDKLAD MGDYRGQVAD VDLAWWRGAY 
QINGLKIVKT TGKVPVPFLD APLIDLSVSW HALWYDKAVV AEVTFVHPEL NFVDGGSKQA
SQTGQGTDWR QQLEKLLPIT LNEVRIDNGV LTFRNFNSKP PVDLKATRLN ASIRNLTNVR
DQKGRRDASF EGTALIAGDA NVESRATFDP FSDFDDFEFR LRATGIELRK LNDFASAYGK
FDFNAGHGDV VIEAQAENGR LNGYIKPLLR DVDVFDWQQD VEEKDKGFFR SVWEALVGAT
ETVLKNQPKN QFATRVELSG SVRKQDVSAF EAFLQILRNG FVQAFNARYE QPAPKSD