Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1241 |
Symbol | |
ID | 5194452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1407703 |
End bp | 1407924 |
Gene Length | 222 bp |
Protein Length | 73 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640585707 |
Product | FmdB family regulatory protein |
Protein accession | YP_001266586 |
Protein GI | 148546484 |
COG category | [S] Function unknown |
COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.292209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTT ATGACTATCA ATGTGCGTCC TGCGAGCACC GCATGGAAGT GCTGCAGAAG ATCAGCGCCG CGCCGCTGAC CGATTGCCCG GCCTGTCAGG CGCCGGCACT GAAAAAGCTG CTGTCGGTGC CAGGCTTTCG CCTGAGCGGT AACGGTTGGT ACGAAACCGA CTTCAAGACC GGGGCGAAAA AGAATCTGGC AGGCGGCGAC AAGGCCGACT GA
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Protein sequence | MPLYDYQCAS CEHRMEVLQK ISAAPLTDCP ACQAPALKKL LSVPGFRLSG NGWYETDFKT GAKKNLAGGD KAD
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