Gene Pput_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1241 
Symbol 
ID5194452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1407703 
End bp1407924 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content60% 
IMG OID640585707 
ProductFmdB family regulatory protein 
Protein accessionYP_001266586 
Protein GI148546484 
COG category[S] Function unknown 
COG ID[COG2331] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.292209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTT ATGACTATCA ATGTGCGTCC TGCGAGCACC GCATGGAAGT GCTGCAGAAG 
ATCAGCGCCG CGCCGCTGAC CGATTGCCCG GCCTGTCAGG CGCCGGCACT GAAAAAGCTG
CTGTCGGTGC CAGGCTTTCG CCTGAGCGGT AACGGTTGGT ACGAAACCGA CTTCAAGACC
GGGGCGAAAA AGAATCTGGC AGGCGGCGAC AAGGCCGACT GA
 
Protein sequence
MPLYDYQCAS CEHRMEVLQK ISAAPLTDCP ACQAPALKKL LSVPGFRLSG NGWYETDFKT 
GAKKNLAGGD KAD