Gene Pput_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1176 
Symbol 
ID5193528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1325223 
End bp1325534 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content58% 
IMG OID640585634 
Producthypothetical protein 
Protein accessionYP_001266521 
Protein GI148546419 
COG category[S] Function unknown 
COG ID[COG5626] Uncharacterized conserved small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.417835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AAACAAGCAC CCTCTATGCC AAATTGCTTG GCGAGACGGC AATCATCGAG 
TGGAAAGCGC TGGAGCGTTT TTGGGCCAAG GGTGACCTGA TTTGGGTCGA CCCTAGCCTT
GACCTGATCG CCGTTGCTGA GGCGATGGCC GAGAATCGCA GCGAGATCTT CGCCAAGTGG
CGTAGTGATG GCACTGTTGG GCCGGTATCG GCCGAGCAGG CATTGGACCT GCAAAGCCGC
GACCCAGAGA TCTGGGCGGT GGTGGTTTCG CCGTTCATCG TGATACAGGT GAAGGGCCAG
GAAGAAGCGT GA
 
Protein sequence
MTDQTSTLYA KLLGETAIIE WKALERFWAK GDLIWVDPSL DLIAVAEAMA ENRSEIFAKW 
RSDGTVGPVS AEQALDLQSR DPEIWAVVVS PFIVIQVKGQ EEA