| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1115 |
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| Symbol | |
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| ID | 5194156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1262264 |
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| End bp | 1263124 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640585573 |
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| Product | DeoR family transcriptional regulator |
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| Protein accession | YP_001266460 |
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| Protein GI | 148546358 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.360982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCTG TTGGGGCCGC CATGCGGCCC CAATCGTCCA CTGGCCGTCA TCCCCTTCCT
ACGGCATCAT TGCAGAATTT GTCCGGCAGC CCCAAAGGAC CGCCCATGAA TCTGCCCCCT
CGCCAACAAC AAATCCTCGA ACTGGTACGC GAACGCGGCT ATGTCAGTAT CGAGGAAATG
GCGCAGCTGT TCGTTGTCAC TCCCCAGACC ATCCGACGCG ACATCAACCA GCTTGCCGAG
CTCAACCTGT TGCGTCGTTA TCACGGCGGC GCGGCTTACG ATTCGAGCAT CGAGAACACC
GCCTACGCCA TGCGTGCCGA CCAGATGCGC GACGAAAAGC AGCGCATTGC CGACGCCGTA
GCCCGGCAGA TTCCCGACCA TGCGTCGCTG TTCATCAACA TCGGCACCAC CACCGAATCG
ATCGCACGGG CGCTGCTCAA CCACAACCAC CTGAAAGTCA TCACCAACAA CTTGCACGTG
GCGGCGATCC TGGCCGCCAA GGACGATTTC GAAGTGCTGG TGGCGGGTGG CACGGTACGC
CGTGATGGTG GTGTAGTCGG CCAGGCCAGT GTCGATTTCA TTAACCAGTT CAAGGTCGAC
TTCGCCCTGG TGGGCATCAG CGGTATCGAC GAGGATGGCA GCCTGCTCGA TTTCGACTAT
CAGGAAGTGC GGGTGTCGCA AGCCATCATC GCCAATGCCC GGCAAGTGAT CCTCGCGGCC
GATTCCAGCA AGTTCGGGCG CAATGCCATG GTGCGTCTGG GCTCGATCGA CCTGGTCGAC
TGCCTGGTGA CCGACCAGAC ACCAACCCCA ACCCTTACCC AATTGTTGAA CCAGAACAAG
ATCAGGCTTG AGGTGGTTTG A
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| Protein sequence | MIAVGAAMRP QSSTGRHPLP TASLQNLSGS PKGPPMNLPP RQQQILELVR ERGYVSIEEM
AQLFVVTPQT IRRDINQLAE LNLLRRYHGG AAYDSSIENT AYAMRADQMR DEKQRIADAV
ARQIPDHASL FINIGTTTES IARALLNHNH LKVITNNLHV AAILAAKDDF EVLVAGGTVR
RDGGVVGQAS VDFINQFKVD FALVGISGID EDGSLLDFDY QEVRVSQAII ANARQVILAA
DSSKFGRNAM VRLGSIDLVD CLVTDQTPTP TLTQLLNQNK IRLEVV
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