| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1102 |
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| Symbol | |
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| ID | 5191814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1241844 |
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| End bp | 1246124 |
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| Gene Length | 4281 bp |
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| Protein Length | 1426 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640585560 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001266447 |
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| Protein GI | 148546345 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.484648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CCGCCAAACA CCACCCGGTG CTCGAGCTGT TCCACCCTGC CGTCAGCACC
TGGTTCCGCC GCCGCTTCGC CACGGTCACC GATGCCCAGG CACAGGCCTG GCCGTTGATC
CACGCCGGGC AGTCCATGCT GCTGGCCGCA CCGACCGGCT CAGGCAAGAC CCTGAGCGCT
TTTCTGGCCG TGCTAGATGA GCTGCTGCGT GAAGGCATGA AGCAACAGGG CGAACTGCCC
GCACAGACCC TGGTGATCTA CGTTTCACCT CTGAAGGCCC TGTCCAATGA CATTCGTCTG
AACCTGCAGG CCCCGCTCGA AGGCATCAGC CAAGCCGTTG CAGAGCAAGG CCTGAACGCC
CCACGCATCA CCACGGCGGT ACGCACCGGC GATACTCCGC AGAAGGAACG CGCCGCCATG
CGCAAGCTGG CCCCGCACAT TCTGGTGACG ACCCCCGAAT CGCTTTACGT GCTGATGGGC
TCGGCTTCTG GCCGTGAAGG CCTGGCCCAT GTGCACACGG TGATCGTCGA CGAAATCCAT
GCCTTGGCCG GTAACAAGCG TGGCGCCCAT CTGGCACTGA CCTTGGAACG CCTGCAAGCC
TTGTGCAAAA AGCCACTGCG GCGGATCGGC CTGTCCGCTA CCCAACGCCC GGTCGAACGG
GTGGCACAGT TTCTGGTGGG TAGCGGGCGC CCCTGCGCCA TTGTCGATAT CGGCCATGCC
CGCAAGCGTG ACCTGGCCAT CGAAGTGCCG CCGGTACCGT TGGGGGCGGT GATGGCCACT
GATGTCTGGG GCCTGGTGTA TGACCGCTTG GCCACCCTTG CCCGTGAACA CCGCACCACG
CTGGTATTCG TCAATACCCG GCGCCTGGCC GAACGTATCA CCCGCCACCT CAGCGACCGG
CTGGGCAAGG AGGCGGTTGC CGCACACCAT GGCAGCCTGT CCAAAGCGCT GCGCCTGGAT
GCAGAGCAGC GGCTCAAGAG CGGCCAGCTC CAGGTGCTGG TCGCGACCGC ATCGCTGGAG
CTTGGCATTG ATATCGGCGA TATCGACCTG GTCTGCCAGA TCGCCTCGCC GGGCTCGATT
GCCGGCTTCC TGCAACGGGT TGGCCGCGCT GGACACCAGG TCGATGGTGT GCCGAAGGGG
CGCCTGTTCC CCACCTCACG CGATGACCTG ATCGAATGCG TTGCCTTGCT TGACTGCGTT
CGACAGGGCG AACTGGACGC ACTGCACATC CCCCGGGCAC CGCTGGATGT ACTGGCCCAG
CAGATCGTCG CAGAAGCCAG CAACCAGGCC TGGCACGAAC AGGATCTGCT GGATTGCCTG
CGCCAGGCCA CACCTTACGC CGAGCTTGAC CAGCACCATT ACCAGGCCCT GCTGCGCATG
CTCGCCGAGG GCTACAACGG CCGCCAGGGT GTGCGCAGTG CCTACTTGCA CCGTGACGCA
GTGAGCGGCA CGCTGCGTGG CCGACGTGGC AGCCAACTGA CCGCGCTGAC CAGCGGCGGC
ACCATCCCCG ACAACGCCGA CTACGCCGTG TTGCTGGAAC CGCAGGCGCT GAACATCGGC
AGCGTCAATG AAGACTTTGC CGTGGAAAGC ATTGCCGGCG ATATTTTCCA GCTGGGCAAT
GCCTCCTATC GCATTCTGCG CGTCGAGCCG GGCCGGGTGC GGGTAGAGGA TGCTCATGGC
CTGCCACCGA CCATTCCGTT CTGGCTGGGT GAAGCGCCGG GGCGCAGTGA CGAGCTATCT
GCCGCCGTGG CCCGGCTGCA GGCGCGAATC GACCAGCAAC TGGCGCTGGC AGGCGGCGAC
ACGGTGGAGG TACTGGCCTG GTTGCAGGCG ACCTTCGAAC TGGACGAAGC TTGTGCGGGC
CAGTTGCTCG ACTACCTGGC CCGCACCCGT GAAGTGCTTG GCGCCCTGCC CTCGCAGGAT
ACCCTGGTGA TGGAACGTTT TTTCGATGAG TCCGGCGGGA CCCAACTGAT CATTCATTCA
CCCTACGGTA GCCGCATCAA CCGCGCCTGG GGCCTGGCCC TGCGCAAGCG CTTCTGCCGC
ACCTTCAACT TCGAACTGCA GGCTGCCGCC AGCGAGGACG CCATCGTGCT GTCACTGTCG
ACCAGCCACA GTTTCGAGCT GGACGAAGTG TGGCGTTACC TGAACAGCCG CAGCGCTGAG
CCGATTCTCA TCCAGGCCCT GCTCGATGCA CCGCTGTTTG GCGTGCGCTG GCGCTGGAAT
GCAGGCGTGG CCATGGCACT GCCGCGCTTT GTGGGCGGAC GCAAGGTGGC GCCACAAATC
CAGCGCATGA AGAGTGAGGA CCTGGTTGCC GCCGTGTTCC CCGACCAGAT CGCCTGCCTG
GAGAACATCG CCGGCGAGCG GCAGATTCCC GACCATCCGC TGGTCGAGCA GACCCTCGAC
GACTGCCTGC ACGAGGCGAT GGACAGCGAA GGCTGGCTGG CCCTGCTGCG GCGCATGGAA
AGCGGTGCAG TGCGCTTGCT GTGCCGGGAC TTGCCCGCCC CCTCGCCGCT GGCATCAGCG
ATTCTCAACG CCCGGCCTTA TGCCTTTCTG GACGATGCGC CACTGGAAGA ACGACGTACC
CAGGCGGTAC TCAACCGGCG CTGGAACGAC GTGCACAGTA GCGACGACCT GGGCGCGCTG
GACGCTGATG CCATTGCTGC CGTCGCGGCC GAGGCCTGGC CACAGCCGGC CAATCCCGAC
GAAATGCACG AGGCATTGAT GAGCCTGGGT GCCATCGGTC AGGTCGAGGT AGATGCCAAC
CCCTGCTGGG ATTTGCTGCT AAGGCAGCTG GCCAAGGCCG GGCGTGCCTT GCGCCTGCCC
GATGACAAGC TCTGGTTGGC CCGCGAACGC CTGAACCTAC TGCTGGCACT GTACCCCACA
GCGCACAGGG AGCCACCGCT CGAACGGCTC GCTGGCTTTG ACCAGCCCAT CGAGCCCGAC
CACGCACTGA GCGAACTGCT GCGCGCCCGC CTGAGCGGCC ATGGCCCACA GACCCTGGCG
CAAATCGCTG CGCCATTGGG CAAACCGGTA ACCGATATCG AACAGTCGCT GGCCCGCCTG
GAAGCCGAAG GCTATGTGCT GCGCGGGCAT TTCAGCCCAG GTGCCACTGA CCTGCAATGG
TGCGAACGCC ACTTGCTGGC GCGCATCCAC CGCTACACGG TCAAACGCCT GCGCCGCGAG
ATCGAACCGG TCAGCCTGCA AGACTTCATG CGCTTTCTGT TCGATTGGCA GCACCTGGCG
CCAGACGAGC GCCTGCGTGG TCCGCAGGCG GTGGCCGAAG TGCTGGGCCA GTTACAAGGG
TTCCCCAGCG CTGCAGCGGC CTGGGAGGCG GAACTGCTGC CGGCGCGTAT CAAAGACTAC
AGTCCGCATT GGCTCGACGA AGCCTGCCGA AGCGGCCAGT TTGCCTGGAG CCGGCTGGCG
GCAACAGTGG CGAGCAGCAC GTTGACCAGT ACCCCACTGG TGTTGCTGCC GCGGGACCAG
TTGAACACGT GGCGCAGCCT GGCGCCCGCA CCTGCTGTCG ACGCCCTTGG CCTACGTGCG
CAACGTGTGC ACGAAGCGCT GAAAACCCAG GGTGCGCTGT TCTTCGATGA ACTGGCACAT
GAGGCACACC TGCTGCCCAG TGAACTGGAA ACTGCACTGC AGGAGCTGGT GGGCTCGGGC
CTGGCCGGGG CGGACAGTTT CACTGGCTTG CGCAGCCTGA TCACGCCTGC AACCAAGCGC
AGCGCACGTA ACAGCCGCCG AGGCCACCCG CCGCTTTCCA GCAGCATGGC GCATGCCGGA
CGTTGGGCCC TGCTGCGCCG CAGCGATGCG CCACCGGACC ACGACCAGCG CCTGGAGCAC
ATTGCCCGCA CGCTGCTGCG CCGCTATGGC GTGATCTGCT GGCGGCTGTT GGCGCGCGAG
AGTGATGTAC TGCCGCCCTG GCGTGAGCTG CTGCGCTGCT ATCACCGATT GGAAGCGCGT
GGCGAGATCC GGGGCGGGCG CTTCATTGCC GGGCTGGCCG GTGAACAGTT CGCCTTGCCT
GAGGCGGTAG TGTTGCTGCG GCAAGTGAGA CGACGTGAAC CGGACGGAAC GCTGCAGGTG
GTGAGCGCCG GTGACCCGCT GAACCTGATC GGCTCGTTGC TGCCCGGGGC GAAAGTGCCG
GCAGTGATTG GCAACCGGCT TCTGTATCGC GACGGGATAC CGGTGGCGGT GCGGATGGCC
GGGCGTTACG CGTATCTGGT CGAGGCGTCC GCACAGGAGC AGGAAAGCTG GCGGCAAAAA
CTGCTGCGCG CCCCCCTGTA G
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| Protein sequence | MNLPAKHHPV LELFHPAVST WFRRRFATVT DAQAQAWPLI HAGQSMLLAA PTGSGKTLSA
FLAVLDELLR EGMKQQGELP AQTLVIYVSP LKALSNDIRL NLQAPLEGIS QAVAEQGLNA
PRITTAVRTG DTPQKERAAM RKLAPHILVT TPESLYVLMG SASGREGLAH VHTVIVDEIH
ALAGNKRGAH LALTLERLQA LCKKPLRRIG LSATQRPVER VAQFLVGSGR PCAIVDIGHA
RKRDLAIEVP PVPLGAVMAT DVWGLVYDRL ATLAREHRTT LVFVNTRRLA ERITRHLSDR
LGKEAVAAHH GSLSKALRLD AEQRLKSGQL QVLVATASLE LGIDIGDIDL VCQIASPGSI
AGFLQRVGRA GHQVDGVPKG RLFPTSRDDL IECVALLDCV RQGELDALHI PRAPLDVLAQ
QIVAEASNQA WHEQDLLDCL RQATPYAELD QHHYQALLRM LAEGYNGRQG VRSAYLHRDA
VSGTLRGRRG SQLTALTSGG TIPDNADYAV LLEPQALNIG SVNEDFAVES IAGDIFQLGN
ASYRILRVEP GRVRVEDAHG LPPTIPFWLG EAPGRSDELS AAVARLQARI DQQLALAGGD
TVEVLAWLQA TFELDEACAG QLLDYLARTR EVLGALPSQD TLVMERFFDE SGGTQLIIHS
PYGSRINRAW GLALRKRFCR TFNFELQAAA SEDAIVLSLS TSHSFELDEV WRYLNSRSAE
PILIQALLDA PLFGVRWRWN AGVAMALPRF VGGRKVAPQI QRMKSEDLVA AVFPDQIACL
ENIAGERQIP DHPLVEQTLD DCLHEAMDSE GWLALLRRME SGAVRLLCRD LPAPSPLASA
ILNARPYAFL DDAPLEERRT QAVLNRRWND VHSSDDLGAL DADAIAAVAA EAWPQPANPD
EMHEALMSLG AIGQVEVDAN PCWDLLLRQL AKAGRALRLP DDKLWLARER LNLLLALYPT
AHREPPLERL AGFDQPIEPD HALSELLRAR LSGHGPQTLA QIAAPLGKPV TDIEQSLARL
EAEGYVLRGH FSPGATDLQW CERHLLARIH RYTVKRLRRE IEPVSLQDFM RFLFDWQHLA
PDERLRGPQA VAEVLGQLQG FPSAAAAWEA ELLPARIKDY SPHWLDEACR SGQFAWSRLA
ATVASSTLTS TPLVLLPRDQ LNTWRSLAPA PAVDALGLRA QRVHEALKTQ GALFFDELAH
EAHLLPSELE TALQELVGSG LAGADSFTGL RSLITPATKR SARNSRRGHP PLSSSMAHAG
RWALLRRSDA PPDHDQRLEH IARTLLRRYG VICWRLLARE SDVLPPWREL LRCYHRLEAR
GEIRGGRFIA GLAGEQFALP EAVVLLRQVR RREPDGTLQV VSAGDPLNLI GSLLPGAKVP
AVIGNRLLYR DGIPVAVRMA GRYAYLVEAS AQEQESWRQK LLRAPL
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