| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1099 |
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| Symbol | |
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| ID | 5193335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1234949 |
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| End bp | 1238098 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585557 |
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| Product | membrane carboxypeptidase (penicillin-binding protein)-like protein |
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| Protein accession | YP_001266444 |
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| Protein GI | 148546342 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0789569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.292467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGCAC TGTGGCAATC GGAACCAAGC AGAACGGAAG CACCCGAGAT ACCTCCGGCC
GAGACGCCAC AACCCAAGTC CCCCCGTCAG CGTCGGCTAT GGTGGCGGCT GATCATCCTC
ATCCTGCTGG TGGCACTGGT AGCCATAGGT GTTGCCGCGT ATGACGAATT CCGTACCTCC
GAACTGCAAT CGCGCGAGTT CAGCAAACTG GCCGGTACAC TGACCTATTC GCTGCAAGCC
GGTCCCAGCG ATGCCATCAT CTACCCCGGT GACGGGCCGT TCGACAAACG CCTGGGCTAT
AGCGCCCTGG GTGAATTCCT GCCACGCCTG CTCAAGCGCG ACTACCTCAT CAGTGAACAG
GTGAAGTTCT CACCCGCATT GATGAACTAC GTCGATCATG GGCTGTTCGC GCCCTATATC
GAGAAAATCC AGGCCGGCCT GTCGATCACC GACTGCCGCG GCGACACGCT GTACCAGTAC
AACTACCCCC AGCACCTGTA CCCGGACTTT GCAGCGATCC CTCCCGTGAT GGTCAACAGC
TTGCTGTTCA TCGAAAACCG CGACCTGCTG GATACCCAGG ACCCACGTAA CAACCCGGCA
GTGGACTGGC CACGCTTTGC CAAGGCCGCC TACAGCCAGG TCGCCAAGTA CCTGGCCCTG
CCCGGCCAGT CTGCCGGCGG CAGCACCCTG GCCACGCAGC TGGAGAAATA TCGCCACTCA
CCCGACGGCC TGACGGTGTC GGGCGCGGAG AAAATCCGGC AGATGATTTC TGCCAGCGTG
CGTGCCTACC AGGGCGGTCC CGACACCACC GAGGCACGCC AGCGCATCGT GCGTGACTAC
CTCAACAGCG TACCGCTGTC GGCTGTACCT GGGCATGGTG AGGTACATGG CATGGCCGAG
GGCCTGCGGG TGTGGTACGG CGCCGACTTC GACCAGGTCA ACCAGGCCCT GAACGCCACC
GCCACCGACC CCGAGAGCAT GGCCGCACGT GGCCTGGCCC TGCGCCAGGT GCTGTCGCTG
ATGATTGCCC AGCGCCGCCC CTCGCATTAC TTGTCCAAGG GCCGGGTCGA GCTGGCCGAA
CTCACCGATT CGCACATTCG CCTGCTTGCC GCCAACAAGG TCATCGATCA GCCGCTGGCC
GATGCCGCGC TGGCCAGCAA GGCGGTGTAC CGCGACTGGG TCGCGCAGCC GACCATCGTA
CCGATCATTA CCAACAAGGG CATCAGCCTG GCGCGCAACC GCCTGTCGGC CATGCTCAAT
CGCCCGCTGT ACGACCTCGA CCGCCTCGAC CTGTCGGCCA CCAGTACCTT GCAGGCCGAC
CTGCAGTTGC AGATCAGCCA GTACCTGAAA AACCTTGCCG ACCCGGCGTT TGCCGCACAG
ATCGGCCTGA TCGGCGAGCG GCTGCTCACT GCCAAGACCA CCGACCAGGT GAGCTACAGC
TTCACCTTGT TCGAACGCAC CGCCGATGGC TCGCGGGTCC GGGTGCAGAC CGACAGCACC
AACCAGCCCT TCGACATCAA CGAAGGCAGC AAGCTGGAGC TGGGCTCAAC CGCCAAGCTG
CGGGTACTGA CCACCTACCT TGAAATTATC GCCGAGCTGC ACGACAAGTA CGCCGGCAAA
CCTGCCGCCG AGCTGAAGAA GGTCGAAGTG GCCGAACTCG ACCGCATCAC GCAATGGTCG
CTGGAATGGC TGGCGCTGAA CAGCAAGAAC CAGAGCCTTG ACGCCATGCT CGACGCCGCG
CTCGAGCGCA AGTACTCGGC CAACACCGGC GAAGCGTTTT TCACCGGTGG CGGGATGCAT
GTGTTCAACA ACTTCCGCAA GGAAGACAAC AACCGCAACC CGACACTCAA GGATGCACTG
CGCGAGTCGA TCAACCTGCC GTTCATCCGC CTGATGCGCG ACCTGGTGCG CTACGTGACT
TACCAGCAGC CGTACAACCG CGTGCCGCTG CTCAAGGACG ATGCCGACCC GCGCCGCCAG
GAATACCTTG CGCGCTTTGC CGACAAGGAA GGCACCAACT ACCTGATGCG CTTCTGGAAG
AAGTACCAGC GTAAAACCTC GCAACAACGC CTGGACACCT TCCTCGACAG CATGCGCGTG
ACCCCACAGC GGTTGGCGGC GGTACACCGC TACCTGTTCC CCGAGGCAGG CCAGGAAACC
TTCAACGCGT TCGTGCGTGC CCACCTCAAG GGCGACAAGG CCGTGCTGGG CAAACTGACC
GATGGCCGTC TGTCCGAGAT GTACGCAGCT TACGGCCCCG GCAAGTACGA CCTGCCCGAC
CAGGGTTACA TCGCCAAGGT CCACCCACTG GACCTTTGGC TGCTTGGCTA CCTGCTGAAG
AACCCAAGCT CGACACTGAC CGAGATGATC AACGCCAGTC GTTTCGAACG CCAGGAGGTA
TACGGCTGGC TGTTCAAGAG CCGCCACCAG GGCGCCCGTG ACAGCCGCAT CCGCACCATG
GTCGAAATCG AAGCCTTCCT CGATATCCAC CAACGCTGGA AACGCGTGGG CTATCCATTC
GACCACCTGG TGCCCTCATT GGCCACCGCC ATCGGCAGCT CCGGCGACCG CCCCGCTGCC
CTCTCCGAAC TGGTCGGGAT CATCCAGAAC GACGGTGTTC GCCTGCCGAC CCTGCGCATC
GACACCCTGC ATTTCGCAGC CAACACACCC TATGAGACCA AGTTGATCAC AGACCCTGAC
CGGGGCGTGC GAATTCTGCC AGTCGAAGTG GCGCGTGCAC TCAAAGGCGC CATGTCGCAA
GTGGTCGATG CAGGTACCGC GCGGCGTATT TCCGGCAGTT TCAAGCTGCA GGACGGCACC
CCACTGGTGA TGGGCGGCAA GACCGGTACC GGCGACAACC GAATCGAGAG CTTTGGCGCC
GGCGGCCGGC TGATCGGCTC GCGCTCGCTA AACCGCACCG CCACCTTCGT GTTCTTCCTC
GGCGACAACC ATTTCGGCAC GCTGACCGCC TTCGTGCCGG GTCGCACGGC AGAAGCGTTC
AAATTTACTT CGGCGCTGCC AGTGCAGGTG CTCAAGGGCA TGGCACCGAT CCTCATGCCA
TACCTGCAGC CTGGCAATCC GAATGAGTGC AAGCCGCCAC AGGTTGCCCT GCACACACCG
CCACCGGCAG GGAACACATC GACGCAGTAG
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| Protein sequence | MGALWQSEPS RTEAPEIPPA ETPQPKSPRQ RRLWWRLIIL ILLVALVAIG VAAYDEFRTS
ELQSREFSKL AGTLTYSLQA GPSDAIIYPG DGPFDKRLGY SALGEFLPRL LKRDYLISEQ
VKFSPALMNY VDHGLFAPYI EKIQAGLSIT DCRGDTLYQY NYPQHLYPDF AAIPPVMVNS
LLFIENRDLL DTQDPRNNPA VDWPRFAKAA YSQVAKYLAL PGQSAGGSTL ATQLEKYRHS
PDGLTVSGAE KIRQMISASV RAYQGGPDTT EARQRIVRDY LNSVPLSAVP GHGEVHGMAE
GLRVWYGADF DQVNQALNAT ATDPESMAAR GLALRQVLSL MIAQRRPSHY LSKGRVELAE
LTDSHIRLLA ANKVIDQPLA DAALASKAVY RDWVAQPTIV PIITNKGISL ARNRLSAMLN
RPLYDLDRLD LSATSTLQAD LQLQISQYLK NLADPAFAAQ IGLIGERLLT AKTTDQVSYS
FTLFERTADG SRVRVQTDST NQPFDINEGS KLELGSTAKL RVLTTYLEII AELHDKYAGK
PAAELKKVEV AELDRITQWS LEWLALNSKN QSLDAMLDAA LERKYSANTG EAFFTGGGMH
VFNNFRKEDN NRNPTLKDAL RESINLPFIR LMRDLVRYVT YQQPYNRVPL LKDDADPRRQ
EYLARFADKE GTNYLMRFWK KYQRKTSQQR LDTFLDSMRV TPQRLAAVHR YLFPEAGQET
FNAFVRAHLK GDKAVLGKLT DGRLSEMYAA YGPGKYDLPD QGYIAKVHPL DLWLLGYLLK
NPSSTLTEMI NASRFERQEV YGWLFKSRHQ GARDSRIRTM VEIEAFLDIH QRWKRVGYPF
DHLVPSLATA IGSSGDRPAA LSELVGIIQN DGVRLPTLRI DTLHFAANTP YETKLITDPD
RGVRILPVEV ARALKGAMSQ VVDAGTARRI SGSFKLQDGT PLVMGGKTGT GDNRIESFGA
GGRLIGSRSL NRTATFVFFL GDNHFGTLTA FVPGRTAEAF KFTSALPVQV LKGMAPILMP
YLQPGNPNEC KPPQVALHTP PPAGNTSTQ
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