| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1076 |
|---|
| Symbol | |
|---|
| ID | 5194801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 1211333 |
|---|
| End bp | 1211812 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640585534 |
|---|
| Product | CMP/dCMP deaminase, zinc-binding |
|---|
| Protein accession | YP_001266421 |
|---|
| Protein GI | 148546319 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0297502 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC AGATCATCGA TCGCAGTCGC GATCAGGAGT TCATGCGCCT GGCGCTGGCC
TTGGCCGCCG AAGGCGCGGC ACTGGGCGAG GTGCCGGTGG GGGCGGTGCT GGTACAGCAT
GGGCAGGTGA TCGGCCAGGG TTTCAATCGG CCGATCATCG ACAGCGACCC CAGCGCGCAT
GCCGAGATGG TGGCGATCAG GGCGGCAGCC AGGTCGGCCA GCAACTACCG GCTACCCGGC
AGCACCCTGT ATGTGACCCT GGAACCGTGC AGCATGTGTG CGGGGCTGAT CGTGCATTCG
CGGGTGATGC GCGTGGTGTT TGGCGCGCTG GAGCCCAAGG CGGGGATCGT GCAGAGCCAG
GGGCAGTTCT TTGGCCAAGG CTTTCTCAAC CATCGGGTGA TGGTGGAGGG CGGGGTGCTG
GCGCAAGAGT GCGGGCAGAT CCTCAGCGAC TTCTTCAAGG CCCGCCGGGC CAAGGCTTGA
|
|---|
| Protein sequence | MRPQIIDRSR DQEFMRLALA LAAEGAALGE VPVGAVLVQH GQVIGQGFNR PIIDSDPSAH
AEMVAIRAAA RSASNYRLPG STLYVTLEPC SMCAGLIVHS RVMRVVFGAL EPKAGIVQSQ
GQFFGQGFLN HRVMVEGGVL AQECGQILSD FFKARRAKA
|
|---|
| |