| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1050 |
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| Symbol | |
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| ID | 5192650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1180700 |
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| End bp | 1181482 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585508 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001266395 |
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| Protein GI | 148546293 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.36572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTAC CCGACAGCAG GCAAGAAGAC CTGCAATCAA CAAGAGGAAG GACCACCTTG
AGCACTGCCG GCAAATCGAT CCTGATGGTC GACGACGACC AGGAAATTCG TGAACTGCTG
CAAACCTACC TGAGCCGCTC CGGCTTCCAG GTGCATGCCG AGGCTGACGG CAAGGGCTTT
CGCCACGCGC TGGAAACTAC GCCCTGCGAC CTGGTCATTC TTGACGTCAT GTTACCCGAC
GAAGACGGCT TCAGCTTGTG CCGCTGGGTA CGCCAGCACC CACGCCAGGC GCGCGTACCT
ATCATCATGC TCACGGCCAG CTCCGACGAG GCCGACCGGG TCATCGGCCT GGAGCTGGGC
GCTGACGACT ATCTGGGCAA GCCGTTCAGC CCCCGCGAAC TGCAAGCGCG AATCAAGGCT
TTGTTGCGCC GCTCCGAGTT CGGCCAGGCG GCGCCGGGCA GTGCGGTGCT GGCCTTCGAC
GACTGGCGCC TGGACACGGT CAGCCACCGC CTGTTCCACC GTGATGGAGA GGAGGTGATC
CTCTCCGGCG CCGACTTTGC CCTGCTCAAA CTGTTCCTCG ATCACCCGCA GCAAATCCTC
GACCGTGACA CCATCGGCAA CGCCACCCGT GGCCGTGAAC CGATGCCGCT GGACCGTATC
GTCGACATGG CGGTCAGCCG TCTGCGCCAG CGCCTGCGCG ATACCGACAA ACCTCCCCGG
CTGATCCGCA CCGTGCGTGG CAGTGGCTAC TTGTTGGCGG CGCATGTCTG CTGTGCGCCC
TGA
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| Protein sequence | MALPDSRQED LQSTRGRTTL STAGKSILMV DDDQEIRELL QTYLSRSGFQ VHAEADGKGF
RHALETTPCD LVILDVMLPD EDGFSLCRWV RQHPRQARVP IIMLTASSDE ADRVIGLELG
ADDYLGKPFS PRELQARIKA LLRRSEFGQA APGSAVLAFD DWRLDTVSHR LFHRDGEEVI
LSGADFALLK LFLDHPQQIL DRDTIGNATR GREPMPLDRI VDMAVSRLRQ RLRDTDKPPR
LIRTVRGSGY LLAAHVCCAP
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