Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1020 |
Symbol | |
ID | 5194857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 1146781 |
End bp | 1147842 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640585478 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001266365 |
Protein GI | 148546263 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.362766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.829125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGC TCGATCGATA CATCGGCCAG AGCGTGCTGC TGGCCATCCT GGCCGTGCTG GGGATCATCC TCGGCCTGGC TTCGCTTTTC GCCTTCATCG ATGAGATGGG CGACCTGAGT GACACCTACA CGGTGCTGGA GGCAGGCAAC TTTGTCCTGC TTACTGCACC TCGGCGGCTG TATGAAATGC TGCCAATGGC CGCCCTGATC GGTTGCCTGA TCGGCCTGGG CAGTCTGGCC AGCAGCAGCG AGCTGACCAT CATGCGTGCG GCTGGCGTGT CCATCGGCCG TATCGTCTGG GCGGTGATGA AGCCGATGCT GGTGCTGATG CTGGTGGGGC TGCTGATTGG CGAATATGTG GCACCGGTGA CCGAGAACAA GGCCCAGGCC GACCGTTCCC TGGCCCAGGG TGGTGGTGAA GCACAGAGCT CCAAACGTGG CATGTGGCAC CGCCAGGGCG AGGAGTATGT GCACATCAAC GCCGTACAGC CCGATGGCCT GCTGCTGGGC GTGACCCGCT ACCGCTTCGA CAGCGAGCGC AAGATTGTCA CCTCGAGCTT TGCCCGCCGT GCGCAGTACC AGAACGACCA CTGGCTGCTC GCCGATGTGC GTACCACCTA CTTCCGTGGC GACCACACCG AGGTGGTCAA CGCGCCGGAG GAGCGCTGGG ATGTTTCGCT CACGCCAGAA CTGCTCAATA CCGTGATCCT CGCGCCGGAG TCGCTTTCGA TTACCGGGTT GTGGGATTAC ATCCACTACT TGTCTGATCA GGGCCTGAAC AACTCCCGCT ACTGGCTGGC GTTCTGGACC AAGGTGCTGC AGCCGATGGT AACGGCGGCC CTGGTGCTGA TGGCGATCTC GTTCATCTTT GGCCCGCTGC GTTCGGTTAC CCTTGGTCAG CGCGTGTTCA CGGGTGTGCT GGTGGGCTTC GTGTTTCGCA TTGGCCAGGA CCTGCTCGGG CCTTCGAGCC AGGTATTCGG CTTCCCGCCG CTGCTGGCGG TGGTGATACC GGCGGGCATC TGTGCCTTGG CCGGTGTGTG GTTGTTGCGC CGGGCAGGGT AA
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Protein sequence | MAKLDRYIGQ SVLLAILAVL GIILGLASLF AFIDEMGDLS DTYTVLEAGN FVLLTAPRRL YEMLPMAALI GCLIGLGSLA SSSELTIMRA AGVSIGRIVW AVMKPMLVLM LVGLLIGEYV APVTENKAQA DRSLAQGGGE AQSSKRGMWH RQGEEYVHIN AVQPDGLLLG VTRYRFDSER KIVTSSFARR AQYQNDHWLL ADVRTTYFRG DHTEVVNAPE ERWDVSLTPE LLNTVILAPE SLSITGLWDY IHYLSDQGLN NSRYWLAFWT KVLQPMVTAA LVLMAISFIF GPLRSVTLGQ RVFTGVLVGF VFRIGQDLLG PSSQVFGFPP LLAVVIPAGI CALAGVWLLR RAG
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