| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0995 |
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| Symbol | |
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| ID | 5190354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 1122637 |
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| End bp | 1123161 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640585453 |
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| Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
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| Protein accession | YP_001266340 |
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| Protein GI | 148546238 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA
[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGG ACCTCATGCA ACGCGGCAAA GGCATCAAGC TGGCAGTCTT CGACGTGGAC
GGCGTGCTCA CCGACGGGCG CCTGTACTTC CTCGAGGATG GCAGCGAATT CAAGACGTTC
AATACCCTCG ACGGCCAGGG CATCAAGATG CTCATGGCCT CGGGCGTGAC CACCGCAATT
ATCAGCGGGC GCAAGACCCC AGTGGTCGAA CGCCGGGCCA GTAACCTCGG CATCCCGCAC
CTCTACCAAG GCCGGGAGGA CAAATTGGTG GTGCTTGACG GCCTGCTCGC CGAACTGGGC
CTAAGCTATG ATCAAGTGGC TTACCTGGGC GACGACCTGC CCGACCTGCC GGTGATCCGC
CGGGTGGCTC TGGGCATGGC CGTAGCCAAC GCCGCACCGT TCGTACGCCA GCACGCCCAC
GGCGTGACCC AGGCACGTGG CGGCGAAGGC GCGGCCCGTG AATTCTGCGA ATTGATCATG
CAGGCCCAGG GCACCCTGGA CACTGCCAAC GCCAACTACC TGTAA
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| Protein sequence | MNQDLMQRGK GIKLAVFDVD GVLTDGRLYF LEDGSEFKTF NTLDGQGIKM LMASGVTTAI
ISGRKTPVVE RRASNLGIPH LYQGREDKLV VLDGLLAELG LSYDQVAYLG DDLPDLPVIR
RVALGMAVAN AAPFVRQHAH GVTQARGGEG AAREFCELIM QAQGTLDTAN ANYL
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