| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0967 |
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| Symbol | |
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| ID | 5190376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 1093418 |
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| End bp | 1094779 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585425 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001266312 |
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| Protein GI | 148546210 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.695825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0389334 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACC AGAGCACGCC CGAGCGGTTA CAGCGCGGGC TGAAGAATCG CCATATCCAG
CTGATCGCGC TGGGCGGGGC CATCGGTACC GGGTTGTTCC TGGGCATTGC CCAGACCATC
CAGTTGGCCG GCCCCTCCGT GTTGCTGGGC TACGCCATCG CCGGCCTGAT GGCCTTCCTG
ATCATGCGCC AGCTGGGCGA AATGGTGGTG GAAGAGCCGG TTGCCGGCAG CTTCAGCCAC
TTCGCCCACC AATACTGGAG CGAGTTCGCC GGCTTTGTCT CAGGCTGGAA TTACTGGGTG
GTGTACGTGC TGGTCGGCAT GGCCGAGCTG ACGGCGGTCG GTATCTACGT GCAGTACTGG
TGGCCGGACT TCCCCACCTG GGCCACGGCG GCGATTTTCT TCGTGGTGAT CAACCTGATC
AACCTGACCC AGGTAAAGGT CTATGGCGAG ATGGAGTTCT GGTTCGCCCT GGTCAAGGTG
GTAGCCATCG TCAGCATGAT CGGCTTTGGT GCCTGGTTGC TGGGCAGCGG TCATGGTGGC
CCGGATGCCA GCGTTGCCAA CCTGTGGCAG TACGGTGGCT TCTTCCCTAA CGGCGTCACG
GGTCTGGTAA TGGCCCTGGC GGTGATCATG TTCTCGTTTG GTGGCCTGGA GTTGGTCGGC
ATCACGGCTG CCGAGGCTGA CAACCCGCGC GAGAGCATCC CCAAGGCCAC CAACCAGGTG
GTGTACCGCA TCCTGATTTT CTACATCGGT GCCTTGGCAG TGCTGTTGTC GCTGTACCCT
TGGCAGAAGG TGGTGCAGGG CGGCAGCCCG TTCGTGATGA TCTTCCACGA ACTGGACAGC
GACCTGGTGG CGACCATCCT CAATATCGTG GTGTTGACGG CTGCGCTCTC GGTGTACAAC
AGCTGTGTGT ACGCCAATAG CCGTATGCTG TTCGGCCTGG CCAGCCAGGG CGATGCGCCG
CGTCAGTTGC TGAAGGTGAG CCGTAGCGGC GTACCGCTGA CCGCGCTGGC CGTGTCGGCC
TTTGCGACCG GCCTGTGCGT GCTGATCAAT TACCTGATGC CGGGCGGGGC CTTTGGCTTG
CTGATGGCGT TGGCAGTTTC CGCGTTGGTG ATCAACTGGG CGAGCATCAG CATTACCCAC
CTCAAATTCC GCAAGGCCAA GCTGGGCGCC GGGATCACCC CGTTCTACAA AAGCCTGGGG
CACCCACTGA CCAACTACCT GTGCCTGGCG TTCATCGTGC TGATCCTGGT GGTGATGTAC
CTGACGCCGC CGATTCGCAT CTCGGTAATG CTGATCCCGG CATGGATCGC TGTGCTGTGG
GTGGCCTTCA AGCTGAAGAA GGCTCGCCAG GCCAAGGGCT GA
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| Protein sequence | MQDQSTPERL QRGLKNRHIQ LIALGGAIGT GLFLGIAQTI QLAGPSVLLG YAIAGLMAFL
IMRQLGEMVV EEPVAGSFSH FAHQYWSEFA GFVSGWNYWV VYVLVGMAEL TAVGIYVQYW
WPDFPTWATA AIFFVVINLI NLTQVKVYGE MEFWFALVKV VAIVSMIGFG AWLLGSGHGG
PDASVANLWQ YGGFFPNGVT GLVMALAVIM FSFGGLELVG ITAAEADNPR ESIPKATNQV
VYRILIFYIG ALAVLLSLYP WQKVVQGGSP FVMIFHELDS DLVATILNIV VLTAALSVYN
SCVYANSRML FGLASQGDAP RQLLKVSRSG VPLTALAVSA FATGLCVLIN YLMPGGAFGL
LMALAVSALV INWASISITH LKFRKAKLGA GITPFYKSLG HPLTNYLCLA FIVLILVVMY
LTPPIRISVM LIPAWIAVLW VAFKLKKARQ AKG
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