Gene Pput_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0952 
Symbol 
ID5192036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1079083 
End bp1080417 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content64% 
IMG OID640585410 
Producthypothetical protein 
Protein accessionYP_001266297 
Protein GI148546195 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3487] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAA TGCCTCTGGC CTCCGCCAGT CTGCTGGCCA TTGCCATCGC CCTCGCCGGT 
TGCGGTGAAG GCAAGGACGA AAAAGCCGCC GCGCCGCAAG CCCAGGCACC TGCTGCCGCC
ACCACCGCTG TTGCGCCAGG GGCTGTCGAC GAAGCCGCCG GCAAAGCCGT GGTCAAGCAT
TACACCGACA TGGTCTACGC CGTGTACAGC GACTCGCTGA GCACTGCCAA GACGCTGCAG
ACCGCAGTCG ACGCGTTCCT GGCCAAGCCC AACGACGAAA CCCTGAAAGC CGCCAAGGAA
GCCTGGTTCG CCGCGCGCGT ACCGTACCTG CAGAGCGAAA CCTTCCGCTT TGGCAACACC
ATCATCGACG ACTGGGAAGG TCAGGTGAAC GCCTGGCCCC TGGACGAAGG CCTGATCGAC
TACGTCGACA AGAGCTACGA GCACGCCTTG GGCAACCCGG GGGCCAGCGC CAACATCATC
GCCAACACCG AGATCCAGGT GGGCGAAGAG AAGGTCGACG TCAAGGACAT TACCCCCGAA
AAACTGGCTA GCCTGAACGA GCTGGCTGGC TCCGAGGCCA ACGTTGCCAC GGGCTATCAC
GCCATCGAAT TCCTGCTCTG GGGCCAGGAC CTGAACGGCA CCGGCCCTGG CGCTGGCAAC
CGCCCGGCAT CCGACTACCT GGAAGGCCAG GGCGCTACCG GCGGCCACAA CGACCGCCGC
CGCGCCTACC TCAAAGCGGT TACCGACCTG CTGGTCACCG ACCTCGAAGA GATGGTCGGC
AACTGGGCAC CGAACGTCGC CGACAACTAC CGCGCCAAGC TGGAAGCCGA GCCTGTCAAC
GACGGCCTGC GCAAGATGCT GTTCGGCATG GGCAGCCTGT CGCTGGGCGA ACTGGCTGGC
GAGCGCATGA AAGTTTCGCT GGAAGCCAAC TCGCCGGAAG ACGAGCAAGA CTGCTTCAGC
GACAACACTC ACTATTCGCA CTTCTACGAC GCCAAGGGCA TCCGCAACGT CTACCTGGGC
GAGTACACCC GCCCGGACGG CACCAAGCTG ACCGGCCCTA GCCTGTCGTC GCTGGTCGCC
AAGGTTGACC CGGCCGCCGA TGCAGCCCTC AAGGCCGATC TGGAAGCCAC CGAGGCCAAG
CTTCAGGTGA TCGTCGACCA CGCCCTCAAA GGCGAGCACT ACGACCAGCT GATCGCCGCC
GACAATGCTG CCGGCAACCA GATCGTGCGT GACGCCATCG CCGCCCTGGT CAAGCAGACC
GGCTCGATCG AGCAGGCCGC GGGCAAGCTG GGCATTGCCA ACCTGAACCC GGACACTGCG
GATCACGAGT TCTGA
 
Protein sequence
MIRMPLASAS LLAIAIALAG CGEGKDEKAA APQAQAPAAA TTAVAPGAVD EAAGKAVVKH 
YTDMVYAVYS DSLSTAKTLQ TAVDAFLAKP NDETLKAAKE AWFAARVPYL QSETFRFGNT
IIDDWEGQVN AWPLDEGLID YVDKSYEHAL GNPGASANII ANTEIQVGEE KVDVKDITPE
KLASLNELAG SEANVATGYH AIEFLLWGQD LNGTGPGAGN RPASDYLEGQ GATGGHNDRR
RAYLKAVTDL LVTDLEEMVG NWAPNVADNY RAKLEAEPVN DGLRKMLFGM GSLSLGELAG
ERMKVSLEAN SPEDEQDCFS DNTHYSHFYD AKGIRNVYLG EYTRPDGTKL TGPSLSSLVA
KVDPAADAAL KADLEATEAK LQVIVDHALK GEHYDQLIAA DNAAGNQIVR DAIAALVKQT
GSIEQAAGKL GIANLNPDTA DHEF