Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0949 |
Symbol | |
ID | 5193115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 1076521 |
End bp | 1077948 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640585407 |
Product | hypothetical protein |
Protein accession | YP_001266294 |
Protein GI | 148546192 |
COG category | [C] Energy production and conversion |
COG ID | [COG3488] Predicted thiol oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGT CGCTGTCCCG ACTCCTTCCC TTGCTGCTGG CCTTGGCCTT GGCCGCCTGT GACGACGCCC CGCGTTTCAC TCACGCCGAG CCCGGCGAAG CGTTGTCGGG TGGCCAGGCG ACCGTGCAGC GCAGCGACCG CAATGCCTAT TCCCTGCCCT CGGCCAACCT CTCGCCAGCG CTGCGCCTGG ACTTCGCCGT TGGCAACAGC TTCTTTCGCA ACCCCTGGGT GATCGCGCCG TCAACCACCA CCGCGCGTGA TGGTCTGGGC CCGCTGTTCA ATACCAACGC CTGTCAGAAC TGCCACGTGC GCGATGGCCG TGGCCACCCG CCAGAGCCGG GCGACAGCAA CGCGGTGGGT ATGCTGGTAC GCCTGTCGAT CCCCGACCAA CCCTACCTGG CCAAAGTGAT CGAGCGCCTC GGCGTGGTGC CAGAACCTGT CTACGGTACC CAGTTGCAGG ACATGGCCAT TCCCGGCGTG GCGCCCGAAG GCAAGGTGCG GGTGAGCTAC ACCCGCGAAA CCGTGTCATT CAAGGACGGC CATCAGGTCG AGTTGCGCAA GCCAGCCCTG CAAATCACCC AGCTCGGCTA TGGAGTGATG CACCCCGACA CACGCTTTTC TGCGCGGGTG GCACCACCGA TGATCGGCCT GGGCCTGCTT GAAGCGATCC CCGAAGCCGA CCTGCTGGCC AACGAAGACC CGGACGACCG TAACCGCGAT GGCATCCGCG GGCGGGCCAA CCGTGTATGG GACGACGCCC AGGGCAAAAC AGTGATCGGC CGCTTCGGCT GGAAAGCCGG GCAGCCCAAC GTCAACCAGC AGAACGTGCA CGCCTTTGCC GGCGACATGG GCCTGACCAG CACCCTGCTG CCCAACGACG ATTGCACCCC GGCACAAACC GGCTGCCTGG CTGCGCCCAA CGGCGACGGT GCCGATGGCG AGAAAGAAGT CAGCGACAAC ATCCTGCGCC TGGTCACGTT CTACACCCGC AACCTGGCTG TGCCGGCCCG CCGCGACGTC GGCTCGCCAC AGGTGCTGGC GGGCAAGAAC CTGTTCTACC AGGCGGGTTG CCAAGGTTGC CACACACCGC AGTTCACCAC AGCCGCCGAC GCCACCGAAC CCGCATTGGC CAACCAGGTC ATCCGCCCCT ACAGCGACCT GCTGCTGCAT GACATGGGCC CGGGGCTGGC CGACGAGCGC ACCGAATTCG CCGCCAACGG CCAGGACTGG CGTACGCCGC CACTGTGGGG CATCGGCCTG AGCGAAACGG TCAGCGGCCA TAGCCAGTTC CTGCATGACG GCCGCGCCCG CAACCTGCTT GAAGCCGTGC TGTGGCACGG TGGCGAAGCC GAGGCGGCAC GCAATTTCGT ACTCACTTTC GATGCCGAGC AGCGCGCTGC GTTGCTCGCG TTCCTGAACT CACTTTAA
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Protein sequence | MSLSLSRLLP LLLALALAAC DDAPRFTHAE PGEALSGGQA TVQRSDRNAY SLPSANLSPA LRLDFAVGNS FFRNPWVIAP STTTARDGLG PLFNTNACQN CHVRDGRGHP PEPGDSNAVG MLVRLSIPDQ PYLAKVIERL GVVPEPVYGT QLQDMAIPGV APEGKVRVSY TRETVSFKDG HQVELRKPAL QITQLGYGVM HPDTRFSARV APPMIGLGLL EAIPEADLLA NEDPDDRNRD GIRGRANRVW DDAQGKTVIG RFGWKAGQPN VNQQNVHAFA GDMGLTSTLL PNDDCTPAQT GCLAAPNGDG ADGEKEVSDN ILRLVTFYTR NLAVPARRDV GSPQVLAGKN LFYQAGCQGC HTPQFTTAAD ATEPALANQV IRPYSDLLLH DMGPGLADER TEFAANGQDW RTPPLWGIGL SETVSGHSQF LHDGRARNLL EAVLWHGGEA EAARNFVLTF DAEQRAALLA FLNSL
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