Gene Pput_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0949 
Symbol 
ID5193115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1076521 
End bp1077948 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content66% 
IMG OID640585407 
Producthypothetical protein 
Protein accessionYP_001266294 
Protein GI148546192 
COG category[C] Energy production and conversion 
COG ID[COG3488] Predicted thiol oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGT CGCTGTCCCG ACTCCTTCCC TTGCTGCTGG CCTTGGCCTT GGCCGCCTGT 
GACGACGCCC CGCGTTTCAC TCACGCCGAG CCCGGCGAAG CGTTGTCGGG TGGCCAGGCG
ACCGTGCAGC GCAGCGACCG CAATGCCTAT TCCCTGCCCT CGGCCAACCT CTCGCCAGCG
CTGCGCCTGG ACTTCGCCGT TGGCAACAGC TTCTTTCGCA ACCCCTGGGT GATCGCGCCG
TCAACCACCA CCGCGCGTGA TGGTCTGGGC CCGCTGTTCA ATACCAACGC CTGTCAGAAC
TGCCACGTGC GCGATGGCCG TGGCCACCCG CCAGAGCCGG GCGACAGCAA CGCGGTGGGT
ATGCTGGTAC GCCTGTCGAT CCCCGACCAA CCCTACCTGG CCAAAGTGAT CGAGCGCCTC
GGCGTGGTGC CAGAACCTGT CTACGGTACC CAGTTGCAGG ACATGGCCAT TCCCGGCGTG
GCGCCCGAAG GCAAGGTGCG GGTGAGCTAC ACCCGCGAAA CCGTGTCATT CAAGGACGGC
CATCAGGTCG AGTTGCGCAA GCCAGCCCTG CAAATCACCC AGCTCGGCTA TGGAGTGATG
CACCCCGACA CACGCTTTTC TGCGCGGGTG GCACCACCGA TGATCGGCCT GGGCCTGCTT
GAAGCGATCC CCGAAGCCGA CCTGCTGGCC AACGAAGACC CGGACGACCG TAACCGCGAT
GGCATCCGCG GGCGGGCCAA CCGTGTATGG GACGACGCCC AGGGCAAAAC AGTGATCGGC
CGCTTCGGCT GGAAAGCCGG GCAGCCCAAC GTCAACCAGC AGAACGTGCA CGCCTTTGCC
GGCGACATGG GCCTGACCAG CACCCTGCTG CCCAACGACG ATTGCACCCC GGCACAAACC
GGCTGCCTGG CTGCGCCCAA CGGCGACGGT GCCGATGGCG AGAAAGAAGT CAGCGACAAC
ATCCTGCGCC TGGTCACGTT CTACACCCGC AACCTGGCTG TGCCGGCCCG CCGCGACGTC
GGCTCGCCAC AGGTGCTGGC GGGCAAGAAC CTGTTCTACC AGGCGGGTTG CCAAGGTTGC
CACACACCGC AGTTCACCAC AGCCGCCGAC GCCACCGAAC CCGCATTGGC CAACCAGGTC
ATCCGCCCCT ACAGCGACCT GCTGCTGCAT GACATGGGCC CGGGGCTGGC CGACGAGCGC
ACCGAATTCG CCGCCAACGG CCAGGACTGG CGTACGCCGC CACTGTGGGG CATCGGCCTG
AGCGAAACGG TCAGCGGCCA TAGCCAGTTC CTGCATGACG GCCGCGCCCG CAACCTGCTT
GAAGCCGTGC TGTGGCACGG TGGCGAAGCC GAGGCGGCAC GCAATTTCGT ACTCACTTTC
GATGCCGAGC AGCGCGCTGC GTTGCTCGCG TTCCTGAACT CACTTTAA
 
Protein sequence
MSLSLSRLLP LLLALALAAC DDAPRFTHAE PGEALSGGQA TVQRSDRNAY SLPSANLSPA 
LRLDFAVGNS FFRNPWVIAP STTTARDGLG PLFNTNACQN CHVRDGRGHP PEPGDSNAVG
MLVRLSIPDQ PYLAKVIERL GVVPEPVYGT QLQDMAIPGV APEGKVRVSY TRETVSFKDG
HQVELRKPAL QITQLGYGVM HPDTRFSARV APPMIGLGLL EAIPEADLLA NEDPDDRNRD
GIRGRANRVW DDAQGKTVIG RFGWKAGQPN VNQQNVHAFA GDMGLTSTLL PNDDCTPAQT
GCLAAPNGDG ADGEKEVSDN ILRLVTFYTR NLAVPARRDV GSPQVLAGKN LFYQAGCQGC
HTPQFTTAAD ATEPALANQV IRPYSDLLLH DMGPGLADER TEFAANGQDW RTPPLWGIGL
SETVSGHSQF LHDGRARNLL EAVLWHGGEA EAARNFVLTF DAEQRAALLA FLNSL