Gene Pput_0700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0700 
Symbol 
ID5195295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp785413 
End bp785760 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content63% 
IMG OID640585158 
Productendoribonuclease L-PSP 
Protein accessionYP_001266048 
Protein GI148545946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.219752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0254422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTC GCTACGGATC AAGCGCGCGG ATGTCACTGG CGGTCAGTTA CAGGGGCCTG 
TTCGAAACGG CAGGCATCGT GGCCGATGAC CTGCAACAGG ATGTGCAGGG GCAGTTGCGT
CAGGCGCTGA GCGTGATCGA CGGCCTGATG GTGCAGGCCA ACGTCGGCAA GGCGCAGCTG
ACGCGGGTTC AGATGTGGCT TGCCGACTAC CGCCACTTCG ACCTGGTCAA CGAAGTGTAC
GACGCCTGGT TGCAAGGCTG TGCAAAACCG GTGCGGGCCT GCGTAGGCGG CGCCCTGGGG
GATGGCTACC TGGTAGAGGT GCAGGTGTTC GCTGTGTGCC CCGAATAG
 
Protein sequence
MITRYGSSAR MSLAVSYRGL FETAGIVADD LQQDVQGQLR QALSVIDGLM VQANVGKAQL 
TRVQMWLADY RHFDLVNEVY DAWLQGCAKP VRACVGGALG DGYLVEVQVF AVCPE