Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0664 |
Symbol | |
ID | 5190182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 748653 |
End bp | 749393 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640585119 |
Product | hypothetical protein |
Protein accession | YP_001266016 |
Protein GI | 148545914 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.326173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.173002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGACC TGACGCAGGC GTTGCTGTTC CCCGACTGGC CGGCCCCGGC CTCGGTGCGC GCCTGTGTCA CCACCCGTCA GGGCGGCGTC AGCTTGCCGC CTTACGAAAC CTTCAACCTC GGCGACCATG TTGGGGATGA CCCTGCCGCG GTTGCCGAGA ACCGCCGCCG CCTGAGCGAA CAGTTCACCA TCCAACCGGC CTGGCTCAAG CAGGTGCATG GGCGGGTGGT GGCGGATGCC GACCCGGCGG TGGTCGCCGA GGCCGATGCC AGCTGGACCC ACCAGCCTGG CATTGCCTGC ACCGTGATGA CCGCCGATTG CCTGCCTGCG CTGTTCTGCG ACCGTGCCGG CACCCGCGTG GCGGCGGCAC ATGCGGGCTG GCGCGGGCTG GCGGGTGGCG TGCTGGAAGC CACGCTGGAC CGGCTGGCGC TGCCGCCAGC AGAGGTGCTG GTGTGGTTGG GGCCTGCCAT TGGCCCGCAA GCGTTCGAAG TGGGGCTGGA AGTGCGTGAT GCCTTTACCG CCGTGCACCC GCAAGCAGCT CGGGCATTCG TCGACGGCGA ACGGCCAGGC AAGCTGTTGG CGGATATCTA TGAGCTGGCG CGTATTCGCC TGGCTGCCCG TGGCGTGACT GCTGTTTATG GCGGTGGTTT GTGCACGGTC AGTGATGCGC GGTTCTTCTC CTATCGCCGT ACCCCGCAGG GTGGGCGTTT TGCATCGTTG GTCTGGCTGG ACCCGCGCTA G
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Protein sequence | MSDLTQALLF PDWPAPASVR ACVTTRQGGV SLPPYETFNL GDHVGDDPAA VAENRRRLSE QFTIQPAWLK QVHGRVVADA DPAVVAEADA SWTHQPGIAC TVMTADCLPA LFCDRAGTRV AAAHAGWRGL AGGVLEATLD RLALPPAEVL VWLGPAIGPQ AFEVGLEVRD AFTAVHPQAA RAFVDGERPG KLLADIYELA RIRLAARGVT AVYGGGLCTV SDARFFSYRR TPQGGRFASL VWLDPR
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