| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0654 |
|---|
| Symbol | |
|---|
| ID | 5193139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 739095 |
|---|
| End bp | 740372 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640585109 |
|---|
| Product | allantoate amidohydrolase |
|---|
| Protein accession | YP_001266006 |
|---|
| Protein GI | 148545904 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.385596 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.174957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCC GCATCGATCC CCCGCTGCAC CTGCTCGGCC AAGGCCCTCT GATCAACCGC
GAGCGCCTGT GGCAATCATT GATGGACCTG GCCCAACTCG GCGCCACCGC CAAGGGCGGC
GTATGCCGCC TGGCCCTGAC CGACCTCGAC CGCCAGGCGC GCGACCTGTT CGTACACTGG
TGCGAACAGG CCGGCTGCAC GGTCAGCGTC GACGCCATCG GCAATATCTT CGCACGCCGC
CCCGGGCGCA ACCCTGCCCT GCCGCCCATC ATGACCGGCA GCCACATCGA CACCCAACCC
ACCGGCGGCA AGTTCGATGG CTGCTACGGC GTCATGGCCG GCCTCGAAGT GATGCGTACG
CTCAACGACT TGCACCTGAC CACCGAAGCC CCGCTGGAAG TGGTGGTATG GACCAACGAA
GAAGGTTCGC GCTTCCCGCC CTGCATGATG GGCTCGGGCG TGTTTGCCGG TAAGTTCGGC
CTGCAGGAAA CCCTGGACAA GGTCGATGAC CAAGGTCTGT CGGTCGGCGC TGAGTTGCAG
CGCATCGGCT ACGCCGGCCC GCGCGTGCCC ACCGGGCATG CCGTGGGCGC CTACTTCGAA
GCGCATATCG AGCAAGGCCC GGTGCTGGAA GACCAGCGCA CCACCATCGG CGTGGTCCAG
GGCTGCCTGG GGCAAAAATG GTTCGACCTG ACCCTTACCG GCGTCGAGGC GCATGCAGGC
CCCACACCCA TGCACCTGCG CAAGGACGCA TTGGTCGGCG CAGCCGAGGT GGTGGCTGCA
GTCAACCGCG TCGCTCACGC GCACCAGCCA CATGCCTGCG GCACGGTCGG CTGCCTGACC
TTGCACCCAG GCTCGCGCAA CGTCATCCCC GGCCAGGTGC ACATGACCAT CGACCTGCGC
CACCTCGACC CTGGGCACCT CGACGCCATG GTCAGCGAAG TGCGCGCAGC CATCGAAAAC
AGCACGGCGA AACATGGCCT GAGCTATCAG CTGACCCCGA CAGCCGACTT CCCGCCGCTG
TACTTCGCCG AGCAGTGCGT GGATGCCGTG CGCCAGGGGG CGCGCGCGCT GGGCCTGAGC
CACATGGATA TCGTCAGCGG CGCCGGTCAC GATGCAATCT TCCTCGCCGA GCTGGGCCCG
GCCGGGATGA TCTTCGTGCC ATGCGAAGGC GGCATCAGCC ACAACGAAAT CGAAAATGCC
GCGCCCCAGG ACCTGGCCGA TGGTTGCGAC GTCCTGTTGC GCGCCATGTT CCAGGCCGCC
AACCCGGGAG CCCGTTGA
|
|---|
| Protein sequence | MNTRIDPPLH LLGQGPLINR ERLWQSLMDL AQLGATAKGG VCRLALTDLD RQARDLFVHW
CEQAGCTVSV DAIGNIFARR PGRNPALPPI MTGSHIDTQP TGGKFDGCYG VMAGLEVMRT
LNDLHLTTEA PLEVVVWTNE EGSRFPPCMM GSGVFAGKFG LQETLDKVDD QGLSVGAELQ
RIGYAGPRVP TGHAVGAYFE AHIEQGPVLE DQRTTIGVVQ GCLGQKWFDL TLTGVEAHAG
PTPMHLRKDA LVGAAEVVAA VNRVAHAHQP HACGTVGCLT LHPGSRNVIP GQVHMTIDLR
HLDPGHLDAM VSEVRAAIEN STAKHGLSYQ LTPTADFPPL YFAEQCVDAV RQGARALGLS
HMDIVSGAGH DAIFLAELGP AGMIFVPCEG GISHNEIENA APQDLADGCD VLLRAMFQAA
NPGAR
|
|---|
| |