| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0614 |
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| Symbol | |
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| ID | 5193048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 692749 |
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| End bp | 693219 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585066 |
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| Product | peptidase A24A, prepilin type IV |
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| Protein accession | YP_001265966 |
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| Protein GI | 148545864 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0179326 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA TTGTTCTCCT GCTGTGGCTT GCCTTGTGCT CCGAACAGGA TGTGCGTCAA
CGCCAGATCT CCAACGTGTT GACCCTGGGG GCGGCTGGCT GCGCCCTGGC CTGGCTGTTC
AGCACCGGTC ACAGCTGGAT AGGCGCCGAA GCCAGCGAGG CCGGTTGGGC GCTGGCCATC
GTCATGCTGC TGACCCTGCC AGGCTACATG CTCGGCCGCT TCGGCGCCGA CGACGTCAAG
CTCATGGGCG CCCTGGCCTT GGCCACCAGC CCGCAATATG TGCTCGGCAC CTTCATTGGC
GCGGGTGTCA CTGTACTGGT CTGGCTACTG ACCCGCCGCC GCCTGTGGAC GCTGCTCAAC
CCCAAGGTCA AGAAGCGTTT GCAGGCCCTG ACCGAAGAAA TGGGCGACAA GCAGGCGTTC
GTCCCCTATG TGTTATCAGG TTTTCTTCTA ACGGCCGTAT GGATCCAATA A
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| Protein sequence | MQSIVLLLWL ALCSEQDVRQ RQISNVLTLG AAGCALAWLF STGHSWIGAE ASEAGWALAI
VMLLTLPGYM LGRFGADDVK LMGALALATS PQYVLGTFIG AGVTVLVWLL TRRRLWTLLN
PKVKKRLQAL TEEMGDKQAF VPYVLSGFLL TAVWIQ
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