| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0569 |
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| Symbol | |
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| ID | 5191930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 634840 |
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| End bp | 637014 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640585021 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001265921 |
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| Protein GI | 148545819 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.931435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGTT TCAAAAGTGT GGGCAGCTTA CAGCGGGTTC GGGGATGGCT GGCGCTGGGG
TTGCTGGCGC CGTTTTCTTT ATCGGCAGTG GCCGAAACGG TAGCGGCCCA GGCGGCCGAA
GACAACTCGC TTGATCTGCC TGCATTGACC ATCGAAGGCA ACCGCCTGTA CGACATGCTG
CCTTCGGAAG AAACCGGCGG TTACAGCGTC GATGCCGCTA CCGTGGGCAC CAAGACGCCG
GCAGCGCTCA AGGACATCCC GCAGTCGATC ACCGTCTACA CCCAGGACTA CGTCAAGGAT
CGCCAGTTCG TGCACCTGGA TGACCTGGCC AAGTACACCG CTGGCCTGCG CACCCTGACC
AATGACAGCG GCCGCTCGTC GATCTACGCC CGTGGCTACG AGTACAGCGA GTTCAATATC
GACGGCCTGC CGGCGCCCAT GGCCAGCATC TTCGGTACTG TCCCGTCGTT GGCGGCGTTC
GACCGCGTCG AAATCATGCG CGGGCCGGCC GGGCTGTTTA GCAGTACCAG CGAGCTGGGT
GGCATCGTCA ACATGGTGCG CAAGCGCCCG ACCGCCGAGT TTCAGGGGCA TATCGAAGGC
AGCTACGGCA CCTGGGACAC CAATCATGAG GAAATCGACC TGAGCGGGCC GCTGGACGAG
GCCGGTCGCG TGCGCGGGCG CTTCATCGCA TCCCGTGACG ACACCAATGG TGAAGTGGAC
TACAACGCCA ACACCAGCAA CACCTACTAC GGTGCGCTGG ACATCGACCT GGACGACGCC
ACCACCCTGT CGTTCGGCCT GATGCATGAA GTGAAGAACA TCACCCCGCA CAACGGCTAC
CCGGCCACGT TGTCCGGCGA GGTGCCCGAC TTCAGCCATT CGCGTTTCCT GGGGGCCGAC
TGGAACTACT TCGACGGCAA GACCACCGAC TTGGTCGCCG AGCTGACCCA CCGCTTCGAC
AATGGCGGTT ACGGCCGTGT CGCGGCCCGT GGCTCGCACC GCGACACCAA CTATCTGTAC
GCCTTCACTG CAACCAATGC CACCACAGGC GCCAACTCCG AGCGCGCCAG CGCCCGTGAT
TTCACGCAAG ACACTTATTC GCTGGACGCC AGCTACAGCC AGCCGTTCGA GACCTTCGGG
CAGGTAAGCG AGTTTGTGGT CGGGAGTGAC TACAAGAACT ACGACACCGA GTACCTCAAC
GGCACCACCA ATCTCGGCGC GATCAACGTG AATACTTACT CGCCGAAGCA GTTCGCCAAG
CCGTCGCCCA ACTACAGCAC CGAGACCGGC ATGCAGGAAG AGGAGTACGG CCTGTACTCC
AAAGTGACCT TCCGCCCGGT GGAACGCCTG GCGCTGATTG CCGGTGGCCG CTTCAGCTGG
TATCGCGGTG ACTTCTACAC CACCACCCTT AGCAGCGGCG CCACCACCAA TGACAGCAAA
CGCGTCGACG GCCACTTCAC CCCTTATGGT GGCCTGGTCT ATGACCTGAC CGACAACCAC
GCGCTGTACG CCAGCTATTC GCAGGTGTTC AAGCCGCAGT CCGACACCGA CAGCAATGGT
CGGGTGCTGA AACCGCGTGA AGGCGAGCAG TACGAGTTCG GCCTCAAGAG CAGCTACTTT
GGCGGCGACT TGAATACGCG CTTCTCGGTA TTCCGCCTGA CCGACAAGAA CCGCGCTACC
ACCGTGTACG ATGCTGATGG TGTGGCCACC ACCGACTCCG TTGCATCCGG CAAGACCCGC
GTGAAGGGCG CGGAAGTGGA AGTGAGCGGC AAGCTGACGC CAAACTGGGA ACTGCTGGCT
GGCTACACGT GGATGGAGAC CGAAACCGTC AAGGGGGACG CCGAAACCAC GTTCTTCATC
ATGCCGCGCA ACCAGGCTTC GCTTTGGAGC AAGTACACCA TCAGCCAAGG GCCGCTGACC
GGCTTGGCCG TGGGTGGCGG TATATCGGCG ATGAGCAACT TCCATTCCGA GAGTGGCGGC
GTGCGTATCG ATGCACCGGG CTATGCCACG GTGGATGCGA TGCTGTCTTA CCCGGTGACT
TCGAAGCTGA CGGCCACCCT CAACGTCAAT AACCTGTTCG ACCGGGACTA CCTGTCGCGG
GTGGGGTCTA CCTCGACGTT CAACTTCTAC GGGCCGTCGC GCAGCATGAT GGTTGGGGCG
CGGTATGACT TCTGA
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| Protein sequence | MTGFKSVGSL QRVRGWLALG LLAPFSLSAV AETVAAQAAE DNSLDLPALT IEGNRLYDML
PSEETGGYSV DAATVGTKTP AALKDIPQSI TVYTQDYVKD RQFVHLDDLA KYTAGLRTLT
NDSGRSSIYA RGYEYSEFNI DGLPAPMASI FGTVPSLAAF DRVEIMRGPA GLFSSTSELG
GIVNMVRKRP TAEFQGHIEG SYGTWDTNHE EIDLSGPLDE AGRVRGRFIA SRDDTNGEVD
YNANTSNTYY GALDIDLDDA TTLSFGLMHE VKNITPHNGY PATLSGEVPD FSHSRFLGAD
WNYFDGKTTD LVAELTHRFD NGGYGRVAAR GSHRDTNYLY AFTATNATTG ANSERASARD
FTQDTYSLDA SYSQPFETFG QVSEFVVGSD YKNYDTEYLN GTTNLGAINV NTYSPKQFAK
PSPNYSTETG MQEEEYGLYS KVTFRPVERL ALIAGGRFSW YRGDFYTTTL SSGATTNDSK
RVDGHFTPYG GLVYDLTDNH ALYASYSQVF KPQSDTDSNG RVLKPREGEQ YEFGLKSSYF
GGDLNTRFSV FRLTDKNRAT TVYDADGVAT TDSVASGKTR VKGAEVEVSG KLTPNWELLA
GYTWMETETV KGDAETTFFI MPRNQASLWS KYTISQGPLT GLAVGGGISA MSNFHSESGG
VRIDAPGYAT VDAMLSYPVT SKLTATLNVN NLFDRDYLSR VGSTSTFNFY GPSRSMMVGA
RYDF
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