| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0564 |
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| Symbol | ribB |
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| ID | 5191489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 629620 |
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| End bp | 630270 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640585016 |
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| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| Protein accession | YP_001265916 |
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| Protein GI | 148545814 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.626847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.558651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCACCC AGCACCACAC GCAATTTCCC ACTGTTTCCG CCGCCATCGC CGCCTTCCAG
GCCGGGCGCC CTGTACTGTT GCTCGACGAT GACGACCGCG AGGACGAAGC GGACATCATT
GCCGCCGCCG AGAACATTAC GCTGCAGACC ATGGCCATGA TGATTCGCGA TTGCAGCGGC
ATCGTCTGCC TGTGCCTGGA CGAAGCCACC GTCGACGAAC TGCAACTGGC GCCCATGGTG
CAGAACAACC AGGCCCGCCA CGGCACCGGT TTCACCGTCA CCATCGAGGC GGCCGAAGGT
ATCACCACCG GGGTTAGCGC CCAGGACCGC ATCACCACCA TTGACGCAGC ACTGCGTTCC
AGCGCCGAAC AGCGCCATAT CGTCAGCCCG GGGCATGTTT TTCCGCTGCG CGCCCGCAAT
GGCGGTGTGC TGACCCGCCG TGGGCACACC GAAGGTTCGG TAGACCTGGC ACGCCTGGCC
GGCCTGCGCC CGGCGGCGGT GCTGTGCGAG TTGATGAACC CCGATGGCAG CATGGCCCGT
GGTGAGCAGG TGGCAGTGTA TGCGCGGCAG TACAACTTGC CAGTGCTGAC CATCGAGGAA
CTGGCGCGGT ACCGTGAAGC CATGATGGAA CGGGAAGCTG CTACGGCTTG A
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| Protein sequence | MFTQHHTQFP TVSAAIAAFQ AGRPVLLLDD DDREDEADII AAAENITLQT MAMMIRDCSG
IVCLCLDEAT VDELQLAPMV QNNQARHGTG FTVTIEAAEG ITTGVSAQDR ITTIDAALRS
SAEQRHIVSP GHVFPLRARN GGVLTRRGHT EGSVDLARLA GLRPAAVLCE LMNPDGSMAR
GEQVAVYARQ YNLPVLTIEE LARYREAMME REAATA
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