Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0541 |
Symbol | |
ID | 5195474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 609923 |
End bp | 611188 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584993 |
Product | hypothetical protein |
Protein accession | YP_001265893 |
Protein GI | 148545791 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCTGC TCCGCCTTGC CTTGGCCAGC CTGGCCAACC GCCGCTTCAC GGCGTTTCTG ACCGCCTTTG CCATTGCCCT GTCGGTGTGC CTGCTGCTGG CTGTTGAGCG GGTCCGTACC GAAGCCCGTG CCAGCTTCGC CAGCACCATC AGCGGCACCG ACCTGATTGT CGGTGCACGC TCCGGCTCGG TGAACCTGCT GCTGTACTCG GTGTTCCGCA TTGGCAACGC GACCAACAAC ATCCGCTGGG ACAGCTTCCA GCACTATGCA CAGGACCCAC GGGTGAAGTG GGCAATCCCG ATCTCGCTGG GCGACTCGCA CCGCGGTTAC AGAGTGATGG GTACCACCAC GGATTACTTC AGCCATTACC AGTACGGCCG CCGCCAGCAC CTGGAACTGA GCCAGGGGCG TACGTTCGCC AACGACCCGT TCGAAGTGGT GCTCGGCGCC GAAGTGGCCG AGGCATTGCA CTACAAGCTG GGTGACAAGC TGGTGCTGGC CCACGGTGTG GCCGCAATCA GCCTGGTCAA GCACGACGAC AAGCCGTTTA CCGTGGTCGG CGTACTCAAG CGCACCGGCA CACCCGTCGA CCGCACCCTG CATATCAGCC TGGGCGGCAT GGAAGCGATC CATATCGACT GGCACAACGG CGTACCCGCC CGTGGCGCCG GCCGCATCAG CGCCGAGCAG GCCCGTACCA TGGACCTGCA ACCAGCCGCC ATCACTGCGT TCATGCTTGG CCTTAACAGC AAGATCGCAA CCTTCAGTTT GCAGCGAGAG ATCAACGAGT ACCGCAGCGA GCCGTTGCTG GCGATCCTGC CAGGGGTCGC CCTGCAGGAG CTGTGGAGCC TGATGGGCAC TGCAGAACAG GCATTGTTCG TGGTGTCACT GTTCGTGGTG CTGACCGGTT TGATCGGCAT GCTCACGGCG ATTCTCACCA GCCTCAACGA ACGCCGCCGA GAGATGGCGA TACTGCGTTC GGTCGGGGCC CGGCCTTGGC ATATTGCGGG GTTGCTGGTA CTGGAAGCCC TGTCACTGGC CTCGGTCGGG ATCGTGGCCG GGCTTGGCTT GCTATATGCG GGTATCGCCC TGGCGCAGGG GTATGTGCAG GCCAACTATG GTTTGTACTT GCCACTGGCT ATGCCGAGTA CCCATGAATG GACCTTGCTG GCTATCATCC TGGGGGCCGC GTTGCTGATG GGCAGCGTGC CGGCGTGGCG GGCTTACCGG CAATCGCTGG CCGACGGCCT GTCCATACAC CTCTGA
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Protein sequence | MYLLRLALAS LANRRFTAFL TAFAIALSVC LLLAVERVRT EARASFASTI SGTDLIVGAR SGSVNLLLYS VFRIGNATNN IRWDSFQHYA QDPRVKWAIP ISLGDSHRGY RVMGTTTDYF SHYQYGRRQH LELSQGRTFA NDPFEVVLGA EVAEALHYKL GDKLVLAHGV AAISLVKHDD KPFTVVGVLK RTGTPVDRTL HISLGGMEAI HIDWHNGVPA RGAGRISAEQ ARTMDLQPAA ITAFMLGLNS KIATFSLQRE INEYRSEPLL AILPGVALQE LWSLMGTAEQ ALFVVSLFVV LTGLIGMLTA ILTSLNERRR EMAILRSVGA RPWHIAGLLV LEALSLASVG IVAGLGLLYA GIALAQGYVQ ANYGLYLPLA MPSTHEWTLL AIILGAALLM GSVPAWRAYR QSLADGLSIH L
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