Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0535 |
Symbol | |
ID | 5192787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 604911 |
End bp | 605795 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640584987 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001265887 |
Protein GI | 148545785 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATGC GCCTAATGCT GTTGGGTGGT GGCAATGCCC TCGGGCAAGC GCTGATTCGT CTTGGGGCCG AGGAGGACAT CGCATTCCTG GCACCGCGCC CGCCCGAGAA CGGCTGGGCG CCCTCAAGCC TCACTCAGCT GCTCGATGAC CATCGCCCCG ACGCGCTGGT CAACCTGGCC TATTACTTCG ACTGGTTCCA GGCCGAGTCG GTCAGCGAGC AGCGCCTGGT TCAACAGGAG CGGGCGGTGG AGCGGTTGGC AGAGCTGTGC CAGCACCATC AGATCACCTT GGTGCAGCCC TCCAGCTACC GTGTGTTCGA TGGTTCGCGG GCCACGGCCT ATAGCGAAAA GGACGAGCCA GTGCCGCTGG GCTTGCGTGG CCAGGCCCTA TGGCGCATCG AGCAGAGCGT GCGTGCGGCC TGCCCGCAGC ATGTGTTGCT GCGCTTTGGC TGGTTGCTGG ACGAGAGCAT CGATGGCGCG TTGGGCCGCT TCCTGACCCG TGCCGAGCAA CCACAGGAAC TGCTGCTGGC CGATGATCGA CGTGGCAACC CGACGCCGGT TGATGATGCC GCCCGAGTGA TCCTGTCGGT GCTCAAGCAA CTGGATTGCA ATGCGCCGCT GTGGGGCACC TACCATTACG CCGGCAATGA GGCGACCACG CCGCTGGCGC TGGGCCAGGC GATCCTCGCC GAGGCCGGTC AATACCGCCA GCTGGCCGTT CAGGCCCCCA CGCCGCAGGC CCATGCCGCG CGCCCGGATG CCAGCGAAGA GCCACAGCAC GCGGTACTGG CCTGCAAGAA AATCCTTCAT ACCTTCGGTA TCAAGCCGCG TGCCTGGCGC GCTGGTTTGC CACCTCTACT GGACCGGTTC TACCGCCATG GCTGA
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Protein sequence | MRMRLMLLGG GNALGQALIR LGAEEDIAFL APRPPENGWA PSSLTQLLDD HRPDALVNLA YYFDWFQAES VSEQRLVQQE RAVERLAELC QHHQITLVQP SSYRVFDGSR ATAYSEKDEP VPLGLRGQAL WRIEQSVRAA CPQHVLLRFG WLLDESIDGA LGRFLTRAEQ PQELLLADDR RGNPTPVDDA ARVILSVLKQ LDCNAPLWGT YHYAGNEATT PLALGQAILA EAGQYRQLAV QAPTPQAHAA RPDASEEPQH AVLACKKILH TFGIKPRAWR AGLPPLLDRF YRHG
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