Gene Pput_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0531 
Symbol 
ID5190227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp602035 
End bp602844 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID640584985 
ProductCro/CI family transcriptional regulator 
Protein accessionYP_001265885 
Protein GI148545783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.532711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC ACTTCGCTAC AAACCTCAAA CTTGCCTGCA GTCACTACCG CTCTATTTCC 
GAAGTTTGCC GCCAGCTGTC GATCAACCGC GCACAGTTCA ACAAGTACCT GAGCGGGCAA
AGCCGTCCGA CGGCTTTCAA CCTGAAGCGT ATCGGCGACT TCTTCGGTGT CGAGGATTAC
GAACTGAACC TGCCCGCCGA GCAGTTCGCC CGTCTGATCG GTGCGCGGGT ATCGCCCCAG
GCCCAGCAGC CCAGTGACCC GATCAGCGAG TTGTTCCGCC CGTTGCACGA ACATGGCGGC
AACCTTTCGC GCTATTGCGG TTACTACTTC GAGTACTCCA ACTGCATGTC GGTGCCGGGC
ACGACCCTCG TGTCGCTGGT GCACCTGTGG GAAGAGCGCG GCCGTTTTCT GTTCGAGCGT
CAGGAACGGC AGGAACGCTC CAGCACCACC GATCAGCATG CCGAGGTACG CTGCCGCTAC
CTGGGGGCGG CGTTCCAGCT GCAGGACCGG ATGTTCCTCA TCGACTACGA GTCGCTGACG
TTCAACGAAA TGAGCCAGAC CATCCTCATC CCCAGCTTCA AAAGCCGCAT TACCCGGCTG
AATGGCCTGA AGGCCGGCGT ATCCAGCGGT GACCGGCGCA ACCCGGCCTG TACCCGGGTG
GTGTGGGAAT ACCTGGGCGA GGAGATCAAT CGCATCAATG CGTATCGGCA GGTGAAACTG
TACCGGCCGG ATGATCCGCG TATAGATGAC GATGTGCGTG AGCGGTTGAG TGTGGCGCCG
TTGCGCAACG GTCTGTTCGA GATCGAGTAA
 
Protein sequence
MSDHFATNLK LACSHYRSIS EVCRQLSINR AQFNKYLSGQ SRPTAFNLKR IGDFFGVEDY 
ELNLPAEQFA RLIGARVSPQ AQQPSDPISE LFRPLHEHGG NLSRYCGYYF EYSNCMSVPG
TTLVSLVHLW EERGRFLFER QERQERSSTT DQHAEVRCRY LGAAFQLQDR MFLIDYESLT
FNEMSQTILI PSFKSRITRL NGLKAGVSSG DRRNPACTRV VWEYLGEEIN RINAYRQVKL
YRPDDPRIDD DVRERLSVAP LRNGLFEIE