| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0524 |
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| Symbol | |
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| ID | 5190178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 593123 |
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| End bp | 594073 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640584978 |
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| Product | formate dehydrogenase, beta subunit |
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| Protein accession | YP_001265878 |
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| Protein GI | 148545776 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.979482 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGCC AAGACATCAT CGCCCGCTCG GCCACCACTA CCGTGCCGCC CTCGGTGCGT
CAGCAGGAGC AGGTCGCCAA GCTGATCGAC ACTACCAAGT GCATCGGCTG CAAGGCCTGC
CAGGTGGCGT GCTCGGAGTG GAATGAACTG CGTGACGAGG TTGGCCACAA CCACGGCACC
TACGACAACC CCCAGGACCT CACTGCCGAG ACCTGGACAC TGATGCGCTT TACCGAGCAT
GAGCGCGACG ACGGCAACCT GGAGTGGCTG ATCCGCAAGG ACGGCTGCAT GCACTGTGCC
GACCCAGGTT GCCTGAAGGC ATGCCCGAGC CCGGGCGCGA TCATCAAGCA CGCCAACGGT
ATCGTCGACT TCAACCAGGA CCACTGCATC GGCTGCGGCT ACTGCATCAC CGGCTGCCCG
TTCAACATCC CGCGTATCTC GCAGAAAGAC CACAAGGCGT ACAAGTGCAC CCTGTGTTCC
GATCGCGTCA GCGTGGGGCT GGAGCCGGCG TGTGTGAAAA CCTGCCCGAC CGGAGCGATC
GTGTTCGGCA GCAAGGACGA GATGAAAGTG CATGCGGCCG AGCGCATCGT CGATCTGAAG
TCGCGGGGCT ACGACAAGGC CGGGTTGTAC GACCCGGATG GCGTCGGTGG TACCCACGTG
ATGTACGTGC TGCACCATGC CGACACACCG AAGCTGTATG CCGGCCTGCC GGACCAGCCA
GTGATCAGTC CGTTGGTGGG GTTGTGGAAG GGCTTCACCA AGCCGCTGGC GCTGTTGGCC
ATGGGCGCGG CGGTGCTGGC GGGGTTCTTC CACTATGTGC GGATCGGCCC ACAGCGTGTC
GAGGAGGATG AACACCCGAC ACCGCCGGAC GAAAGCGTGC ATCAAGTGGA CCCGTCGGTC
CATGTCTATG ATCCGAAGCA GCCCGGTGGG CAAGGGGAGC AGCGGCCATG A
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| Protein sequence | MASQDIIARS ATTTVPPSVR QQEQVAKLID TTKCIGCKAC QVACSEWNEL RDEVGHNHGT
YDNPQDLTAE TWTLMRFTEH ERDDGNLEWL IRKDGCMHCA DPGCLKACPS PGAIIKHANG
IVDFNQDHCI GCGYCITGCP FNIPRISQKD HKAYKCTLCS DRVSVGLEPA CVKTCPTGAI
VFGSKDEMKV HAAERIVDLK SRGYDKAGLY DPDGVGGTHV MYVLHHADTP KLYAGLPDQP
VISPLVGLWK GFTKPLALLA MGAAVLAGFF HYVRIGPQRV EEDEHPTPPD ESVHQVDPSV
HVYDPKQPGG QGEQRP
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