Gene Pput_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0518 
Symbol 
ID5192304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp586119 
End bp586664 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content63% 
IMG OID640584972 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_001265872 
Protein GI148545770 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.183562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTG GGGTTAACAA AGTCATTCTG GTCGGTACCT GTGGCCAGGA TCCCGAAGTC 
CGCTACCTGC CCAACGGTAA CGCCGTGACC AACCTGAGCC TGGCCACCAG CGAGCAGTGG
ACTGACAAGC AGTCGGGCCA GAAGGTCGAG CGTACCGAGT GGCACCGTGT GTCGCTGTTC
GGCAAGGTTG CCGAAATCGC TGGCGAGTAC CTGCGCAAGG GTTCGCAGTG CTACATCGAA
GGCAAGCTGC AGACCCGCGA GTGGGAAAAA GACGGCATCA AGCGCTACAC CACCGAGATC
ATCGTCGACA TCAACGGCAC CATGCAGCTG CTCGGCGGTC GTCCGCAAGG CCAGCAGCAG
GGCGGCGACC CATACAACCA GGGTGGCGGC AATTACGGTG GCGGCCAGCA GCAACAGTAC
AACCAGGCAC CGCCACGCCA GCAGGCCCAG CGCCCGCAAC AGGCCCCTCA GCGCCCAGCG
CCGCAACAGC CTGCGCCGCA GCCGGCTGCT GACTTCGACA GCTTCGATGA CGATATTCCG
TTCTGA
 
Protein sequence
MARGVNKVIL VGTCGQDPEV RYLPNGNAVT NLSLATSEQW TDKQSGQKVE RTEWHRVSLF 
GKVAEIAGEY LRKGSQCYIE GKLQTREWEK DGIKRYTTEI IVDINGTMQL LGGRPQGQQQ
GGDPYNQGGG NYGGGQQQQY NQAPPRQQAQ RPQQAPQRPA PQQPAPQPAA DFDSFDDDIP
F