Gene Pput_0479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0479 
SymbolrplL 
ID5193279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp552127 
End bp552492 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content52% 
IMG OID640584932 
Product50S ribosomal protein L7/L12 
Protein accessionYP_001265833 
Protein GI148545731 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00592833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00479203 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCTGA CTAACGAACA AATCATCGAA GCAATCGGCC AGAAAACCGT TCTGGAAGTT 
GTTGAGCTGA TCAAAGCAAT GGAAGAAACC TTCGGCGTTA CCGCTGCTGT TGCCGCTGCT
GGCCCAGCTG CTGCTGCTGC CGTTGTTGAA GAGCAGACCG AGTTCAACGT TGTTCTGGTT
GAAGCCGGCG ACAAGAAAGT GAACGTGATC AAAGCCGTTC GCGAACTGAC CGGTCTGGGC
CTGAAAGAAG CCAAAGAGAA AGTCGATGGC GCTCCTCAGG TTGTAGCTGA AGGCGTTTCG
AAAGAAGCCG CTGAAGACGC TAAGAAGAAG CTGGAAGAAG CAGGCGCTAA AGTCGAGCTG
AAGTAA
 
Protein sequence
MSLTNEQIIE AIGQKTVLEV VELIKAMEET FGVTAAVAAA GPAAAAAVVE EQTEFNVVLV 
EAGDKKVNVI KAVRELTGLG LKEAKEKVDG APQVVAEGVS KEAAEDAKKK LEEAGAKVEL
K