| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0314 |
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| Symbol | |
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| ID | 5194744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 357842 |
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| End bp | 359020 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640584760 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001265671 |
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| Protein GI | 148545569 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit
[TIGR03415] choline ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.183429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0271339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA TTCGTTTCGA AGACGTCGAC GTCATCTTCT CCAACAAGCC GCGCGAGGCA
CTGGCGCTGC TGGACCAAGG CCAGACCCGC GAGCAGATCC TCAAGCAGAC CGGCCTGGTG
GTGGGTGTCG AAAAGGCCAA CCTCGATATC AACAAAGGCG AGATCTGCGT GCTGATGGGC
TTGTCTGGCT CGGGCAAGTC GAGCCTGCTG CGCTGCATCA ACGGCCTCAA CACCGTCAGC
CGTGGCAAGT TGTTCGTCGA GCACGAAGGC AAGCACATCG ACATTGCCAA TTGCTCCGCG
GCCGAGCTGA AGATGATGCG CACCAAGCGC ATTGCCATGG TGTTCCAGAA GTTTGCCCTG
ATGCCTTGGC TGACGGTGCG CGAGAACATC AGCTTTGGCC TGGAAATGCA GGGTCGCCCG
GAAAAGGAAC GGCGCAAGCT GGTCGACGAG AAGCTTGAGC TGGTGGGCCT GACCCAGTGG
CGCAACAAGA AGCCGGATGA GCTGTCTGGC GGCATGCAGC AGCGCGTGGG CCTGGCCCGG
GCGCTGGCGA TGGATGCCGA CATCTTGCTG ATGGACGAAC CGTTCTCGGC CCTGGATCCA
CTGATCCGCC AGGGCCTGCA AGATGAGCTG CTTGGCCTGC AGGCCAAGTT GAGCAAAACC
ATCGTGTTCG TCAGCCACGA CCTGGACGAG GCGCTGAAAC TGGGTACCCG CATTGCGATC
ATGAAAGACG GTCGGATCAT CCAGTACAGC AAGCCGGAGG AGATCGTGCT GAACCCGGCC
GACGAATACG TGCGCACTTT CGTCGCCCAT ACCAACCCGC TGAACGTGCT GTGCGGGCGC
AGCCTGATGC GCAGCCTGGA CAATTGCAAA CGGGTCAATG GCTCGGTGTG CCTGGACCCA
GGTATCGATT CGTGGCTGGA CCTTGGCGAA GGCGGCGCGC TCAAGCGTGC ACGCCAGGGC
CAGAACGGGC TGGACATGCA GAGATGGGCA CCGGGGCAAG ATGTGGAGCT GCTGGAGCGC
AGGCCGACCG TGGTGCACGC CGACATCGGC ATGCGTGAGG CACTGCAGAT TCGTTATCAA
ACCGGCAACA AGCTGGTGCT GCAGGATAAC GACAGGGTGG TGGGGATACT CGGGGATACC
GAGCTTTACC ACGCTCTGCT CGGCAAGAAC CACGGGTGA
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| Protein sequence | MSIIRFEDVD VIFSNKPREA LALLDQGQTR EQILKQTGLV VGVEKANLDI NKGEICVLMG
LSGSGKSSLL RCINGLNTVS RGKLFVEHEG KHIDIANCSA AELKMMRTKR IAMVFQKFAL
MPWLTVRENI SFGLEMQGRP EKERRKLVDE KLELVGLTQW RNKKPDELSG GMQQRVGLAR
ALAMDADILL MDEPFSALDP LIRQGLQDEL LGLQAKLSKT IVFVSHDLDE ALKLGTRIAI
MKDGRIIQYS KPEEIVLNPA DEYVRTFVAH TNPLNVLCGR SLMRSLDNCK RVNGSVCLDP
GIDSWLDLGE GGALKRARQG QNGLDMQRWA PGQDVELLER RPTVVHADIG MREALQIRYQ
TGNKLVLQDN DRVVGILGDT ELYHALLGKN HG
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