Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0301 |
Symbol | |
ID | 5191245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 343944 |
End bp | 344717 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640584746 |
Product | ABC transporter related |
Protein accession | YP_001265658 |
Protein GI | 148545556 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4598] ABC-type histidine transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.492075 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0971272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGG CCACGCCCGC GCTGGAAATC CGCAATTTGC ACAAACGCTA CGGCGAGCAG GAAATTCTCA AGGGCATTTC GCTGACCGCT CGCGACGGTG ACGTGATCTC CATCCTGGGG TCGTCCGGCT CCGGCAAGTC CACCCTGCTG CGCTGCATCA ACCTGCTCGA GAACCCGCAC CAGGGCGAAA TCCTGGTCGC CGGCGAAGCC CTCAAGCTCA AGGCCGCCAA GAATGGCGAC CTGATCGCAG CCGACAACCG CCAGATCAAT CGCCTGCGCA GCGAAATCGG CTTTGTCTTC CAGAATTTCA ACCTGTGGCC GCACATGTCG ATCCTCGACA ACATCATCGA GGCGCCACGC CGCGTGCTCG GCCAAAGCAA GGCCGAGGCC ATCGAAGCCG CCGAAGCGCT GCTGAACAAA GTCGGCATCT ACGACAAACG CCACAGCTAC CCCGCCCAGC TTTCCGGTGG CCAGCAACAG CGCGCCGCCA TTGCCCGTAC CCTGGCCATG AAGCCCAAGG TCATCCTGTT CGACGAGCCT ACATCGGCAC TCGATCCGGA AATGGTCCAG GAAGTGCTTA ACGTTATCCG CGCATTGGCC GAAGAAGGCC GTACCATGCT GCTGGTGACG CACGAGATGA GCTTTGCCCG CCATGTGTCC AGTGAAGTCG TCTTCCTGCA CCAGGGCCTG GTCGAAGAGC AGGGATCGCC GCAGCAGGTC TTCGAAAACC CGACCTCGGC GCGTTGCAAG CAATTCATGT CCAGCCACCG CTAA
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Protein sequence | MAQATPALEI RNLHKRYGEQ EILKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH QGEILVAGEA LKLKAAKNGD LIAADNRQIN RLRSEIGFVF QNFNLWPHMS ILDNIIEAPR RVLGQSKAEA IEAAEALLNK VGIYDKRHSY PAQLSGGQQQ RAAIARTLAM KPKVILFDEP TSALDPEMVQ EVLNVIRALA EEGRTMLLVT HEMSFARHVS SEVVFLHQGL VEEQGSPQQV FENPTSARCK QFMSSHR
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