Gene Pput_0301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0301 
Symbol 
ID5191245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp343944 
End bp344717 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content61% 
IMG OID640584746 
ProductABC transporter related 
Protein accessionYP_001265658 
Protein GI148545556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.492075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0971272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CCACGCCCGC GCTGGAAATC CGCAATTTGC ACAAACGCTA CGGCGAGCAG 
GAAATTCTCA AGGGCATTTC GCTGACCGCT CGCGACGGTG ACGTGATCTC CATCCTGGGG
TCGTCCGGCT CCGGCAAGTC CACCCTGCTG CGCTGCATCA ACCTGCTCGA GAACCCGCAC
CAGGGCGAAA TCCTGGTCGC CGGCGAAGCC CTCAAGCTCA AGGCCGCCAA GAATGGCGAC
CTGATCGCAG CCGACAACCG CCAGATCAAT CGCCTGCGCA GCGAAATCGG CTTTGTCTTC
CAGAATTTCA ACCTGTGGCC GCACATGTCG ATCCTCGACA ACATCATCGA GGCGCCACGC
CGCGTGCTCG GCCAAAGCAA GGCCGAGGCC ATCGAAGCCG CCGAAGCGCT GCTGAACAAA
GTCGGCATCT ACGACAAACG CCACAGCTAC CCCGCCCAGC TTTCCGGTGG CCAGCAACAG
CGCGCCGCCA TTGCCCGTAC CCTGGCCATG AAGCCCAAGG TCATCCTGTT CGACGAGCCT
ACATCGGCAC TCGATCCGGA AATGGTCCAG GAAGTGCTTA ACGTTATCCG CGCATTGGCC
GAAGAAGGCC GTACCATGCT GCTGGTGACG CACGAGATGA GCTTTGCCCG CCATGTGTCC
AGTGAAGTCG TCTTCCTGCA CCAGGGCCTG GTCGAAGAGC AGGGATCGCC GCAGCAGGTC
TTCGAAAACC CGACCTCGGC GCGTTGCAAG CAATTCATGT CCAGCCACCG CTAA
 
Protein sequence
MAQATPALEI RNLHKRYGEQ EILKGISLTA RDGDVISILG SSGSGKSTLL RCINLLENPH 
QGEILVAGEA LKLKAAKNGD LIAADNRQIN RLRSEIGFVF QNFNLWPHMS ILDNIIEAPR
RVLGQSKAEA IEAAEALLNK VGIYDKRHSY PAQLSGGQQQ RAAIARTLAM KPKVILFDEP
TSALDPEMVQ EVLNVIRALA EEGRTMLLVT HEMSFARHVS SEVVFLHQGL VEEQGSPQQV
FENPTSARCK QFMSSHR