Gene Pput_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0211 
Symbol 
ID5192175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp251283 
End bp252521 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content66% 
IMG OID640584656 
ProductHemY domain-containing protein 
Protein accessionYP_001265570 
Protein GI148545468 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID[TIGR00540] hemY protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTG TCTACCTGTT GGCCGTGCTT GCGATCGTGG TTGCTGCGGC ACTGGGCATC 
GCGGTCGCCA AGCACAGCGG CTATGTACTG GTTTCCTATG GTGGTTTCCG TTATCAGTCG
GGGCTGTGGG CAGCCTTGGC GGGTATTTTG GCGGTCGTCC TGCTGCTGTG GTTGCTGCGC
TATCTGGTCG GCCTGGTGCT GACTTCCAGT GGTGTGGTCA ACCCGTGGTC ACGGCGTAAC
CGCAGCCGAC GTATCCGCCT GGCGATCGAA CAGGGCCAAC TCGATCTTGC CGAAGGCCGC
TGGGCCAGTG CCCAACGGCA CTTGCACCGT GCCGCCGAGG CTGAGCGCCA GCCGTTGCTG
TACTACCTCG GTGCCGCGCG TGCCGCCAAC GAGCAAGGCC GCACCGAAGA CAGCGACAAC
TTGCTGGAGC GTGCCCTGGA GCGCCAGCCG CAAGCGGAGC TGGCCATTGC CCTGACCCAT
GCCCAGTTGC AAATGGACCG TGGCGAAAAC GATGGGGCCC TGGAAACCCT GCTGGCCATG
CAGGAACGCC ACCCGCACAA CGGCCAGGTG CTGCGCTTGC TGCAACGCCT TTACGTGGAG
CGCGGCGACT GGTCTGCACT GATCCGCCTG ATGCCCGACC TGCGCAAGGG TAAAGTGCTG
CCCGCCGCCG AGCTGGCTGC TCTGGAACAA CGCGCCTGGG GCCAGAACCT TAGCCTGGCG
ACCACCCGTG GCGAAGATGC GCTCAGTGCA CGTCAATCCT TGGAGCGCGC CTGGCAGCAG
CTGACCGCAG CCCAGCGCCA GGAGCCACAA CTGGTGCTGG CGTACGCCGA GCAACTGCGC
CAGGTAGGTG CCCAGAACGA GGCCGAACAG GTGCTGCGCA CGGCCCTCAA GCGCGACTAC
GAAAGCCACC TGGCCCGCCT TTACGGCCTG GTGCGTGGTG ATGACCCGGC GCGTCAGCTG
CAAACCGCTG AAGGTTGGCT CAAGGCTCAC CCGCAAGACG CCAGCCTGCT GCTGACCCTG
GGCCGTCTGA GCCTGCAAAA CCGCTTGTGG GGCAAGGCGC GTGACTACCT TGAAAGCAGC
CTGCGCATGG AGCGCAACCC CGAGGCCTGT GCAGAGCTGG CCCGCCTGCT CGCGGGGCTG
GGCGAGACGG AGCGCAGCAA CCAGCTGTTC CAGGAGGGCC TTGGCCTGCT GGACGAGCGC
CTGCTGGCGC TGCCTTTGCC AGAAGGCGTA CGCGCCTGA
 
Protein sequence
MKRVYLLAVL AIVVAAALGI AVAKHSGYVL VSYGGFRYQS GLWAALAGIL AVVLLLWLLR 
YLVGLVLTSS GVVNPWSRRN RSRRIRLAIE QGQLDLAEGR WASAQRHLHR AAEAERQPLL
YYLGAARAAN EQGRTEDSDN LLERALERQP QAELAIALTH AQLQMDRGEN DGALETLLAM
QERHPHNGQV LRLLQRLYVE RGDWSALIRL MPDLRKGKVL PAAELAALEQ RAWGQNLSLA
TTRGEDALSA RQSLERAWQQ LTAAQRQEPQ LVLAYAEQLR QVGAQNEAEQ VLRTALKRDY
ESHLARLYGL VRGDDPARQL QTAEGWLKAH PQDASLLLTL GRLSLQNRLW GKARDYLESS
LRMERNPEAC AELARLLAGL GETERSNQLF QEGLGLLDER LLALPLPEGV RA