Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0190 |
Symbol | |
ID | 5193008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 230602 |
End bp | 231501 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640584635 |
Product | taurine dioxygenase |
Protein accession | YP_001265549 |
Protein GI | 148545447 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCG CCTTGAACGC CTTGTCGTCC ATCGACAGCG CCCAGCCGCA AGTTTTTGAA GTTCGCCCCT TCTCGGGTGC CGTCGGCGCC GAGATCATAG GTCTGGACCT GGCCAAACCG GTCAGCGCCG AGGATTTCAC CCGTATCCAT CGCGCCCACC TCGACCACCA TGTGCTGGTG TTCCGCGACC AGCGTATCAG CCCGGAACAG CAGATCGCCT TTAGCCGCCG CTTCGGTGAG TTACAGATCC ATGTGCTCAA GCAGTTCTTG CTGACTGGCC ACCCCGAGAT CCTGATCGTT TCCAACATCA TCGAAAATGG CCAGAACATC GGCCTGGGTG ATGCCGGCAA GTTCTGGCAT TCGGACCTGT CGTACAAAGA GCTGCCAAGC CTCGGTTCCA TGCTGCATGC CCAGGAACTG CCCAGTGAAG GCGGTGACAC CTTGTTCGCC GACATGCATA AAGCCTGGGA CGCTGTACCT GATACCCTGC GCAAAGTGGT CGAGGGCCGC AGTGCCGCTC ACTCCTATAC CGCCCGTTAC GCTGAAACCA AATTCGAAGG CAACTGGCGC CCGACCCTGA CTGCCGAGCA ACTGGCGCAG GTAAAGGAGG TCATTCACCC GGTAGTCCGC ACCCACCCGG AAAACGGCCG CAAGGCCCTG TTCGTGAGTG AAGGCTTCAC CACCCGCATT GTCGGCCTGC CTGATGATGA AAGCCGCGAC GTGCTGCAGC AGCTGTATGC CCTTAGCGTG CTGGAGCAGA ACATTTACCG CCACCAGTGG CAGCCCCATG ACCTGGTGTT CTGGGACAAC CGCTCGCTGA TCCACTTGGC CACCGGCTGC CCCGCGCACC TGCGGCGCAA GCTGTACCGC ACCACCATCC AGGGCGATGC CCCGTTCTGA
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Protein sequence | MSAALNALSS IDSAQPQVFE VRPFSGAVGA EIIGLDLAKP VSAEDFTRIH RAHLDHHVLV FRDQRISPEQ QIAFSRRFGE LQIHVLKQFL LTGHPEILIV SNIIENGQNI GLGDAGKFWH SDLSYKELPS LGSMLHAQEL PSEGGDTLFA DMHKAWDAVP DTLRKVVEGR SAAHSYTARY AETKFEGNWR PTLTAEQLAQ VKEVIHPVVR THPENGRKAL FVSEGFTTRI VGLPDDESRD VLQQLYALSV LEQNIYRHQW QPHDLVFWDN RSLIHLATGC PAHLRRKLYR TTIQGDAPF
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