Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0148 |
Symbol | |
ID | 5194994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 150719 |
End bp | 152326 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640584589 |
Product | EAL domain-containing protein |
Protein accession | YP_001265507 |
Protein GI | 148545405 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCGA TGTCAGCCTT CATTGCCTTG CTGCGCCAAA TTTTTTACCG CCCCTGGATG CTGGCCACTT TGGCAGCGCT GGCCAGCGCC GCGGTGTTGC TCTCTGCCAG CATTGGCATT GCCCTGCAAC AAATGAAGCA AAGCGAAAGC GAACAGATGA ATGCCCAGGG CGAGCGTTTT CTGGACCGGC TCGAACAGGT GTTCGGCCAG TTGCGCGAAG GGGTAGACCT GCTGCAGGCC CAACCCTTGC GCGGCTGCAG CCCGGCGATG CTGGCAGCCC TGCAACAGGT TGGCCTGAGC TCGCGGTTCA TCTATGAAGC GGCTTATGTA GATGACAATG TTGCCTGCTC CAACCGCGGT GATGAGCGAG CGTTCGTTCC CTTGCGGGCG CCAGATATCC AGGGGCCGAC GTACAGCTAC TGGCTTAACA CAACCACCGA GCCGAACGAG AACCTGGCAG CACTGATGCT GGGCCGGGGC AAGTTTCTGG TGTCCACCTC CCGTGGGCAT TTGACCGATG TGGTGGACCT GCCCCCGGGC GGCAGCCTGG TCGTGGTGCT GGATAACGGC GCCCGGGCCA TTCCGGTGCT TGGCCCGCCA CAGGTATGGC CTCCGCCCTC GGCCTGGTCG ACCAGCCACA AGTCGCTGCT GGAACTCAGT GATCGGCTGA TCTACCGAAT GCCGACCAAG TCGCCGGATT ACCAGTTGGT GCTGATTGCC CCGAGGGCCA GTCTGCCGCT GAGGATGAAC GGCATGCTCT GGTTGCTGTT CCCCGGCAGC GTGCTGGCGG CCTGCTGTAT CGGTTGGTTG GTACTGCAGT TGATTCTGCA ACGGCGGTCG ATGAGCTCAG AGTTGCAAAA TGCCTTGCGT CGAGGAGAGC TGCAGGTGCT CTACCAACCC ATCATCGAGC TCGACAGCCG GCGCTGTGTG GGCGCCGAGG CCTTGGTGCG CTGGCGCCGC CCGGACGGCA CCCTGACCAG CCCGGACCTG TTCATTCCGC TGGCGGAGAA TACCGGGCAG ATTCGCCAGA TCACCGACTT TGTCCTGCAG CGTGTGCTTG AACAGCTTGG CCAGCTATTG CGCTCGCACC CCAAGCTATA CATATCGATA AACCTGGCGG CCTGCGATGT GATGGTGCCA CGTATTGGCC GGGTGGCGGC GCGTTTGTTG GCCTTGCATC GAGTGGCGCC CAGCCAGATT GCCTTCGAGG TGACCGAGCG CGGCCTGATC GACGTGGTGG TCGCCCGTGA CAATCTGCAG GCGCTACGCG CCGTGGGGCA CCAGGTGCTG ATCGACGACT TTGGTACCGG TTATTGCAGC CTGGCCTACC TGCAAACCCT GCCAGTGGAC TGCCTGAAGA TCGACAAGGC ATTCATCGAC GCTCTGGGCC ACGATGCCGC CAGTAGCGGC GTGGCCCCGC ATATCATCCG CATGGCCCAT GACTTGCACT TGCGGGTAAT TGCCGAAGGT ATCGAGTTCG AGGACCAGGC AGTGCTGCTG AACAGCGAGG GGGTCAATTA TGGCCAGGGC TGGTTGTTCG CCCGCCCGCT GAACGCCCGG CAGTTTGCCG AGTTGGTGAC TCGCGGACAC CTGCCGCGGC GGGTGTAG
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Protein sequence | MPSMSAFIAL LRQIFYRPWM LATLAALASA AVLLSASIGI ALQQMKQSES EQMNAQGERF LDRLEQVFGQ LREGVDLLQA QPLRGCSPAM LAALQQVGLS SRFIYEAAYV DDNVACSNRG DERAFVPLRA PDIQGPTYSY WLNTTTEPNE NLAALMLGRG KFLVSTSRGH LTDVVDLPPG GSLVVVLDNG ARAIPVLGPP QVWPPPSAWS TSHKSLLELS DRLIYRMPTK SPDYQLVLIA PRASLPLRMN GMLWLLFPGS VLAACCIGWL VLQLILQRRS MSSELQNALR RGELQVLYQP IIELDSRRCV GAEALVRWRR PDGTLTSPDL FIPLAENTGQ IRQITDFVLQ RVLEQLGQLL RSHPKLYISI NLAACDVMVP RIGRVAARLL ALHRVAPSQI AFEVTERGLI DVVVARDNLQ ALRAVGHQVL IDDFGTGYCS LAYLQTLPVD CLKIDKAFID ALGHDAASSG VAPHIIRMAH DLHLRVIAEG IEFEDQAVLL NSEGVNYGQG WLFARPLNAR QFAELVTRGH LPRRV
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