Gene Pput_0130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_0130 
Symbol 
ID5193398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp131679 
End bp132350 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID640584571 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001265489 
Protein GI148545387 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.337726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCC TGAATTTCTT TGCCAACGTC GACTGGGCCG AAATCTGGCT GGCCACCGTC 
GATACCATGA TCATGCTGTT CGGCTCGCTG TTCTTCACCG TGCTGCTGGG CCTGCCACTG
GGCGTGCTGC TGTTCCTCTG CGGGCCAAAG CAGATGTTCG AACAGAAGGG CGTCTATGCG
CTGCTGTCGC TGGTGGTCAA CATCCTGCGC TCGCTGCCAT TCATCATCTT GCTGATCGTG
ATGATCCCGT TCACCGTGCT GATCACCGGT ACCTCCCTGG GCGTTGCAGG CGCCATCCCG
CCGCTGGTGG TGGGTGCCAC GCCGTTCTTT GCGCGCCTGG TTGAAACCGC CTTGCGTGAA
GTGGACCGCG GCATCATCGA AGCCACCCAG TCGATGGGCG CCACCACTCG CCAGATCATC
ACCAGTGCGC TGCTGCCGGA AGCCCGTCCG GGCATCTTCG CGGCCATAAC GGTAACCGCC
ATCACCCTGG TTTCTTACAC TGCCATGGCC GGTGTGGTGG GTGCCGGTGG CCTTGGTGAC
CTGGCTATCC GCTTCGGTTA CCAGCGTTTC CAGACCGATG TGATGGTAGT GACCGTGGTA
CTGCTGCTGG TACTGGTTCA AGTCCTGCAG AGCGTGGGCG ACAAACTGGT CGTGCATTTT
TCCCGTAAGT AA
 
Protein sequence
MDALNFFANV DWAEIWLATV DTMIMLFGSL FFTVLLGLPL GVLLFLCGPK QMFEQKGVYA 
LLSLVVNILR SLPFIILLIV MIPFTVLITG TSLGVAGAIP PLVVGATPFF ARLVETALRE
VDRGIIEATQ SMGATTRQII TSALLPEARP GIFAAITVTA ITLVSYTAMA GVVGAGGLGD
LAIRFGYQRF QTDVMVVTVV LLLVLVQVLQ SVGDKLVVHF SRK