| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0113 |
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| Symbol | |
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| ID | 5195216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 115166 |
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| End bp | 117160 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640584554 |
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| Product | peptidase M3A and M3B, thimet/oligopeptidase F |
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| Protein accession | YP_001265472 |
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| Protein GI | 148545370 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACC CTCTTCTGCA AGATAGCCAT ATCCCCGTCG ATTACTCTTC CATCACCCTC
GAAAACATGC AGGCGGCATT CGCTCACGTG CTGCAGGCAC ACGAGAACGG TGTCGAACGC
ATCATCCGTG ATCAACGAAC CATGCCCACC TGGGATGACA TGGTGCTGGC GTTGGATGGG
CTGGATAGCC GGCTGCTGGC AGTGTTGTAT GCCGCCTCAC CACTGGTCGG CCGGGATACG
GCGTGGGCCA ACGTCATCAT TGATTTCTAC CGGAAAGTGA CGGCGCGCTT CGAGCAAAAA
TTCGCCAACA CGGGTTTGCA TGACCTGTAT GCACGCTTGG CCGGCAGTGA CATCGGCAAG
CAACTGGATG TCGGGAAGCG TGCCACTTTG CGTTGGCACC TGGACAAGTT CGCCGCTAGC
GGGGCGTTAC TCGACACCGC AGGCAAAGCG CATCTGGCAG ACCTTCAAGC GCAGATTGGC
ACTGCACGCG AGGCGTTCCG CAGCAACATC GACCGGCCTG GGTTGAACAT CACCGATGAA
GCGGAGCTGA GCGGCATCCC GCAGCGGGTA CGTGACGAAT TGGCTGCAAG CGCACAGCAA
GCAGGTAAGC AAGGGTGGTT GATTGCGTGT GACACGGTGA CTACGCGTGA GGTGCTCAAA
CATGCTGCCA ACCGCCAGTT CCGTGAGCGG GTGTACCGGG CTTTTCACGC CCGCGGCGTC
AGCCATGATC GGCAACAGGA CAATAGCTGG TATCTGCAGC AACTGGCGCA ATTGCTTGAG
GAGAAGGCCC TCCTGCTCGG TTATTCCGGC CATCTGGAGC AGAGCCTGCA GGTGAAGAGT
GCCGGTTCGG TAGACCAGGT GCGGGGCTTT CTCCACGATC TGGCCGATCA TGTGCGACCT
GCCATGTTGC GGTGGCGTTC GCAGGTGGAG TGTTGGGCTG CCGAGCAGGG CCTGGGCAAA
CCCCAACCCT GGGATTTCGA GTACCTGCGG TGTGCTTCGC GCAGCGTGTT TCCTGCCGAA
GCGCTGCGCG ATTACTTCCC GCTGAATACT GTTGTCAGTG CGTTGCAGCA ATTGGCGCAG
ACGTTGTTTG GTGCAGTGCT GCAGCCCAAA GCGCTGCCTG TCTGGGATGA CAGCGTGCAG
CCGTTCGAGG TGTGGCAGGA CAGCGCTTTC ATTGGCTTTC TGTATCTGGA TGCCGTGCAA
CACGCAGGCA AGCTGCCAGA CGCGGTGTTC ACCACCTATG TAAGGAATCG CCGGGTCGAT
GCAGAGGGTA TCTGCCAGGC AGCCTCGGTG GTGGTGTTCA GTGATGTGCC GCAAGCGCTG
TCAGGTTCGC AGCCGTTGCT CAATCATTTG TCACTGCGCA AGCTGTTCCA TGAATTCGGC
CATGCCCTGC ACCACCTGCT GGTACGTACG ACGAACCACG TCATGTCCAA TGTGACCGAG
CTGGGCACCG ATGGTGTGGA GTTGTTCGGC AAGCTGTTCG AACGTTGGGT CTGGGACGCG
GACTACCTGG TGGCGATCTC GGCGCGCACG CACGACGGCC GCCAACTATC CCGCAAGCAA
GCCAATGAGT GCCTGCGGCA GCTACGGCAG CAGGGCGTGG AGGAGATCGC GGGTGATCTG
TGCCTGGCGC TGTTCGACAT GGACCTGCAT GGCACACCAA ACGATGGCAG GACCTTTGAA
CAGCGACTGG GTGATGCCCG CGCGCGTTGC GGTTACTGGC CACTCGCTGA CTTTGAACAT
CCGGCGCATG CCTTCGACCA CCTTGTGAAC GGCTACGATG CGGGTTACTA CGCCTACCTG
TGGTCGGATG TGCATGCCTT CGATGTGTTC ACCCGCTTCG AAGCCGAGGG CCTGTTGAAC
GGAGCCACGG GGCGGGCACT GCAGGAAGCA CTGTTCGCCC CAGGGGCATC GCGCCCATTG
CGTGAAGGCA TCGAGGCGTT TCTCGGGCGG CAATCGAGCC AGGCAGCGTA TCTCAGCTGG
CATGGCCTGA GGTAG
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| Protein sequence | MANPLLQDSH IPVDYSSITL ENMQAAFAHV LQAHENGVER IIRDQRTMPT WDDMVLALDG
LDSRLLAVLY AASPLVGRDT AWANVIIDFY RKVTARFEQK FANTGLHDLY ARLAGSDIGK
QLDVGKRATL RWHLDKFAAS GALLDTAGKA HLADLQAQIG TAREAFRSNI DRPGLNITDE
AELSGIPQRV RDELAASAQQ AGKQGWLIAC DTVTTREVLK HAANRQFRER VYRAFHARGV
SHDRQQDNSW YLQQLAQLLE EKALLLGYSG HLEQSLQVKS AGSVDQVRGF LHDLADHVRP
AMLRWRSQVE CWAAEQGLGK PQPWDFEYLR CASRSVFPAE ALRDYFPLNT VVSALQQLAQ
TLFGAVLQPK ALPVWDDSVQ PFEVWQDSAF IGFLYLDAVQ HAGKLPDAVF TTYVRNRRVD
AEGICQAASV VVFSDVPQAL SGSQPLLNHL SLRKLFHEFG HALHHLLVRT TNHVMSNVTE
LGTDGVELFG KLFERWVWDA DYLVAISART HDGRQLSRKQ ANECLRQLRQ QGVEEIAGDL
CLALFDMDLH GTPNDGRTFE QRLGDARARC GYWPLADFEH PAHAFDHLVN GYDAGYYAYL
WSDVHAFDVF TRFEAEGLLN GATGRALQEA LFAPGASRPL REGIEAFLGR QSSQAAYLSW
HGLR
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